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NFDIcore Ontology

Release: 2024-10-21

This version:: https://nfdi.fiz-karlsruhe.de/ontology/2.1.0
Previous version:: https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
Revision:: 2.1.0
Authors:: Harald Sack; Tabea Tietz; Oleksandra Bruns; Etienne Posthumus; Jörg Waitelonis
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Cite as:: Oleksandra Bruns, Tabea Tietz, Etienne Posthumus, Jörg Waitelonis, Harald Sack. NFDIcore Ontology. Revision: v2.1.0. Retrieved from: https://nfdi.fiz-karlsruhe.de/ontology/2.1.0

Ontology Specification

Abstract

### INTRODUCTION The [National Research Data Infrastructure (NFDI) initiative](https://www.nfdi.de/) has seen the establishment of various consortia, each dedicated to developing a research data infrastructure tailored to its respective domain. To facilitate interoperability across these consortia, the NFDIcore ontology (prefix nfdicore) has been developed and serves as a mid level ontology for representing metadata about NFDI resources such as individuals, organizations, projects, data portals, etc. Recognizing the diverse needs of consortia, NFDIcore establishes mappings to a wide array of standards across domains, including the [Basic Formal Ontology (BFO)](https://basic-formal-ontology.org/) and [schema.org](https://schema.org/), which is crucial for advancing knowledge representation, data exchange, and collaboration across diverse domains. To answer domain-specific research questions, NFDIcore is extended following a modular approach, as e.g. with the culture ontology module [CTO](https://gitlab.rlp.net/adwmainz/nfdi4culture/knowledge-graph/culture-ontology), matwerk ontology module [MWO](https://git.rwth-aachen.de/nfdi-matwerk/ta-oms/mwo), etc. Aligning with [IAO](https://github.com/information-artifact-ontology/IAO) and [SCHEMA](https://schema.org/), NFDIcore focuses on describing 3 main concepts: 1. Digital Information Artifacts (nfdicore:Resource), e.g. data sets, data portals, publications, services, software, etc. 2. Independent Continuants that act autonomously (nfdicore:Agent), e.g. organizations and persons 3. Planned processes and events, e.g. nfdicore:Project, nfdicore:Contributing, nfdicore:Event. Current development is managed via [GitHub](https://github.com/ISE-FIZKarlsruhe/nfdicore). Feel free to give feedback, contribute, or raise issues. More detailed information and can be found in the [NFDIcore ontology documentation](https://ise-fizkarlsruhe.github.io/nfdicore/docs/). ### RESOURCES Within NFDIcore, resources encompass a wide range of digital creative works, including datasets, collections, and metadata, as well as offered products and services such as data portals, data curation, and data digitization. These resources are categorized as information content entities (IAO_0000030), derived from material entities (BFO_0000040). Each information content entity may establish "is about" (IAO_0000136) object relations, linking it to other material entities or information content entities that define its subject matter. In NFDIcore, the "is about" property is expanded to offer more detailed semantics and a comprehensive overview of the relationships between resources and material entities. ![image](https://raw.githubusercontent.com/ISE-FIZKarlsruhe/nfdicore/v2.0.0/figures/resources1.png) Apart from relations to information content entities and material entities, resources within NFDIcore can also be described using specific qualities (BFO_0000019). For instance, resources can be associated with academic disciplines (nfdicore:AcademicDiscipline) they belong to or a degree of semantic expressivity the resources hold, allowing for a more nuanced understanding of their context and relevance. For this, property "has quality" (RO_0000086) is extended with more granular nfdicore properties. ![image](https://raw.githubusercontent.com/ISE-FIZKarlsruhe/nfdicore/v2.0.0/figures/resources2.png) Resources within NFDIcore engage in diverse relationships with agents, facilitated by various properties such as nfdicore:contributor, nfdicore:publisher, and nfdicore:contactPoint. While these properties enable direct connections between agents and resources, they may lack some expressivity. In scenarios requiring more detailed semantics to describe the relationship between an agent and a resource, the modeling proposed by BFO can be employed. To maintain consistency, we establish nfdicore properties like nfdicore:publisher as shortcuts using SWRL rules. ![image](https://raw.githubusercontent.com/ISE-FIZKarlsruhe/nfdicore/v2.0.0/figures/resources3.png) ### AGENTS Likewise, in NFDIcore, the concept of Agents extends to both organizations and persons, serving as independent continuants within BFO ontology. Agents are essential for management of research data resources, and include entities such as research institutions, consortia, universities, companies, and individual researchers or data scientists. Within NFDIcore, agents can be directly linked to resources via different relations; may participate in different processes (BFO_0000015) and be associated with diverse roles (BFO_0000023), e.g. nfdicore:PublisherRole, nfdicore:ContributorRole, etc. within the processes. Moreover, agents engage in diverse relationships with other agents, e.g. nfdicore:member, nfdicore:partnerOrganization, etc. For consistency's sake, we streamline NFDIcore properties like nfdicore:contactPoint and nfdicore:fundingOrganization by creating shortcuts through SWRL rules. ![image](https://raw.githubusercontent.com/ISE-FIZKarlsruhe/nfdicore/v2.0.0/figures/agents.png) ### PROCESSES AND EVENTS In general, a process (BFO_0000015) can encompass subordinate processes and may involve instances marked by defined start and end times. Within NFDIcore, a planned process (OBI_0000011) commonly serves to establish connections between agents and information content entities (IAO_0000030), defining the roles (BFO_0000023) of agents with respect to the involved information content entities. The nfdicore:Event is associated with temporal entities that transpire over time, commonly marked by specific incidents or occurrences. The nfdicore:Event, classified as an occurrent (BFO_0000003), serves as a representation for various happenings such as conferences, workshops, or activities like "the 37th German Congress for Art History" or "Workshop "Introduction to Iconclass"". Events are characterized by their start and end times and can be connected to agents involved in the events. ![image](https://raw.githubusercontent.com/ISE-FIZKarlsruhe/nfdicore/v2.0.0/figures/events.png)

NFDIcore: Overview back to ToC

This ontology has the following classes and properties.

NFDIcore: Description back to ToC

NFDIcore ontology

Cross-reference for NFDIcore classes, object properties and data properties back to ToC

This section provides details for each class and property defined by NFDIcore.

Classes

academic discipline
action specification
agent
city
collection
consortium
consortium member
consortium member role
contact point role
contacting
continuant
contributing
contributor role
controlled vocabulary
country
creative work
CreativeWork
curation status specification
data about an ontology part
data curation service
data item
data portal
databases service
dataset
denotator type
directive information entity
disposition
document
entity
event
federal state
function
funding organization role
generically dependent continuant
glossary
immaterial entity
independent continuant
information content entity
libraries & APIs service
licence
license
material entity
media type
MIME-type
objective specification
obsolescence reason specification
occurrent
ontology
organization
person
place
plan specification
planned process
process
programming language
programming language
project
publication
publication
publisher role
publishing process
quality
realizable entity
resource
role
semantic expressivity
service
Service
site
software
software
software development
source code module
spatial region
specifically dependent continuant
specification
standard
storage service
support & consulting service
taxonomy
technological means
thesaurus
tools & applications service
training service
web applications service
website
workflows & pipelines service

academic discipline^c back to ToC or Class ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/AcademicDiscipline

A quality of an entity that specifies the subject area, domain or academic discipline of an entity.

An academic discipline, a research field or domain of an entity, e.g. a domain of a data portal or a field of study of a person.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Example

https://www.wikidata.org/entity/Q12271

Architecture, Art History, Musicology, Media Studies, Performing Arts

has super-classes: quality ^c
is in range of: subject area ^op

action specification^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000007

A directive information entity that describes an action the bearer will take.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Source: OBI Plan and Planned Process branch

Term status: http://purl.obolibrary.org/obo/IAO_0000122

Example

Pour the contents of flask 1 into flask 2

has super-classes: directive information entity ^c

agent^c back to ToC or Class ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/Agent

An independent continuant that acts autonomously and is entrusted with the authority to represent, negotiate, or act on behalf of another agent.

A class that represents entities that are capable of autonomous actions, decision-making, or interaction within a given environment, e.g. persons or organizations.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Example

Torsten Schrade, Linnaea Söhn, Academy of Sciences and Literature Mainz

has super-classes: independent continuant ^c
has sub-classes: organization ^c, person ^c
is in domain of: email address ^dp, subject area ^op
is in range of: has contact point ^op, has contributor ^op, has publisher ^op

city^c back to ToC or Class ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/City

A place that refers to a densely populated urban area.

A city or a town where the thing is located.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Example

Berlin, Hannover, Kyiv

has super-classes: place ^c
is in domain of: of country ^op, of federal state ^op

collection^c back to ToC or Class ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/Collection

A material entity that represents a collection of material entities intended to be understood together as a whole.

A tangible collection of valuables published or curated by an organization or a person.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Example

A collection of arts displayed at the museum

has super-classes: material entity ^c
is in range of: represented collection ^op

consortium^c back to ToC or Class ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/Consortium

An organisation that consists of multiple independent groups and individuals, who join together to collaborate on a specific goal.

A consortium of autonomous organizations collaborating towards a shared goal, operating within the framework of an agreement.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Example

NFDI4Culture, NFDI-MatWerk, DataPLANT.

has super-classes

consortium member^c back to ToC or Class ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/ConsortiumMember

An organization that has a specific role, responsibilities or contributions within the consortium framework.

A consortium member refers to an individual organization that has a specific role, responsibilities or contributions within the consortium framework.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Example

Museums of City Cologne is a member of NFDI4Culture consortium.

is equivalent to: organization ^c and (has role ^op only consortium member role ^c)
has super-classes: organization ^c

consortium member role^c back to ToC or Class ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/ConsortiumMemberRole

A role inhering in an organization that is realized when the organsation is a member of a consortium.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

has super-classes: role ^c

contact point role^c back to ToC or Class ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/ContactPointRole

A role inhering in an agent that is realized when the agent is a contact point of a resource or a project.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

has super-classes: role ^c

contacting^c back to ToC or Class ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/Contacting

A planned process in which the contact information of an entity is provided.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

has super-classes: planned process ^c

continuant^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000002

An entity that exists in full at any time in which it exists at all, persists through time while maintaining its identity and has no temporal parts.

Is defined by: http://purl.obolibrary.org/obo/bfo.owl

has super-classes: entity ^c
has sub-classes: generically dependent continuant ^c, independent continuant ^c, specifically dependent continuant ^c
is in domain of: participates in ^op
is in range of: has participant ^op
is disjoint with: occurrent ^c

contributing^c back to ToC or Class ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/Contributing

A planned process of contibuting or providing information to an endeavor.

The contibution or provision of information to an endeavor.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

has super-classes: planned process ^c

contributor role^c back to ToC or Class ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/ContributorRole

A role inhering in an agent that is realized when the agent is a contact point of an entity.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

has super-classes: role ^c

controlled vocabulary^c back to ToC or Class ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/ControlledVocabulary

Semantic expressivity that refers to a standardized set of terms and descriptors used to index and retrieve information systematically.

A standardized set of terms and descriptors used to index and retrieve information systematically.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Example

the Union List of Artist Names (ULAN), the Cultural Objects Name Authority (CONA)

has super-classes: semantic expressivity ^c
has sub-classes: thesaurus ^c

country^c back to ToC or Class ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/Country

A place that refers to a defined geographical area distinguished by its territorial boundaries, governance structure, and sovereignty.

A country where the thing is located.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

has super-classes: place ^c
is in range of: of country ^op

creative work^c back to ToC or Class ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/CreativeWork

An information content entity that refers to a manifestation of someone's creative effort.

A creative work refers to a digital intellectual or artistic resource, e.g. a dataset, metadata, a guideline, a software and other materials offering relevant information or instructions within their specific domains.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Example

TRANSRAZ Data Model, NFDI4Culture Knowledge Graph, Guide for digital collection management at art museums, NFDI4Culture SPARQL Endpoint, Registry for Tools & Services, RADAR4Culture service, etc.

is equivalent to: information content entity ^c and CreativeWork ^c
has super-classes: CreativeWork ^c, resource ^c
has sub-classes: dataset ^c, publication ^c, publication ^c, software ^c, software ^c, website ^c

CreativeWork^c back to ToC or Class ToC

IRI: https://schema.org/CreativeWork

The most generic kind of creative work, including books, movies, photographs, software programs, etc.

Is defined by: https://schema.org/CreativeWork

has sub-classes: creative work ^c

curation status specification^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000078

The curation status of the term. The allowed values come from an enumerated list of predefined terms. See the specification of these instances for more detailed definitions of each enumerated value.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Source: GROUP:OBI:<http://purl.obolibrary.org/obo/obi>; OBI_0000266

Term status: http://purl.obolibrary.org/obo/IAO_0000125

is equivalent to: { example to be eventually removed ⁿⁱ , metadata complete ⁿⁱ , organizational term ⁿⁱ , ready for release ⁿⁱ , metadata incomplete ⁿⁱ , uncurated ⁿⁱ , pending final vetting ⁿⁱ , to be replaced with external ontology term ⁿⁱ , requires discussion ⁿⁱ }
has super-classes: data about an ontology part ^c
has members: example to be eventually removed ⁿⁱ, metadata complete ⁿⁱ, metadata incomplete ⁿⁱ, organizational term ⁿⁱ, pending final vetting ⁿⁱ, ready for release ⁿⁱ, requires discussion ⁿⁱ, to be replaced with external ontology term ⁿⁱ, uncurated ⁿⁱ

data about an ontology part^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000102

Data about an ontology part is a data item about a part of an ontology, for example a term

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

has super-classes: data item ^c
has sub-classes: curation status specification ^c, denotator type ^c, obsolescence reason specification ^c

data curation service^c back to ToC or Class ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/DataCurationService

The activity of managing and promoting the use of data from their point of creation to ensure that they are fit for contemporary purpose and available for discovery and reuse. For dynamic datasets this may mean continuous enrichment or updating to keep them fit for purpose. Higher levels of curation will also involve links with annotation and with other published materials

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Source: https://doi.org/10.5281/zenodo.10101412

has super-classes: service ^c
is disjoint with: databases service ^c, libraries & APIs service ^c, storage service ^c, support & consulting service ^c, tools & applications service ^c, training service ^c, web applications service ^c, workflows & pipelines service ^c

data item^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000027

An information content entity that is intended to be a truthful statement about something (modulo, e.g., measurement precision or other systematic errors) and is constructed/acquired by a method which reliably tends to produce (approximately) truthful statements.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Term status: http://purl.obolibrary.org/obo/IAO_0000125

Example

Data items include counts of things, analyte concentrations, and statistical summaries.

has super-classes: information content entity ^c
has sub-classes: data about an ontology part ^c

data portal^c back to ToC or Class ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/DataPortal

A website that serves as a centralized platform for accessing, managing, and sharing datasets, information, or resources related to a specific topic, theme, or domain.

An online platform that provides access to datasets.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Example

Bach digital, KultSam, MusiXplora

has super-classes: website ^c
is in domain of: represented collection ^op

databases service^c back to ToC or Class ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/DatabasesService

Software that provides large amounts of structured data from repositories and archives to the user. Usually the data can be uploaded, accessed, searched and/or downloaded via a web browser.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Source: https://doi.org/10.5281/zenodo.10101412

has super-classes: service ^c
is disjoint with: data curation service ^c, libraries & APIs service ^c, storage service ^c, support & consulting service ^c, tools & applications service ^c, training service ^c, web applications service ^c, workflows & pipelines service ^c

dataset^c back to ToC or Class ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/Dataset

A creative work that refers to a structured collection of data, organized typically for a specific goal such as analysis, research, or reference.

Structured information about a resource provided by an organization or a person.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Example

Fotothek Bibliotheca Hertziana Max-Planck-Institut für Kunstgeschichte 320px static derivates research dataset (https://doi.org/10.17617/3.SVH2BT)

has super-classes: creative work ^c
is in domain of: represented collection ^op
is in range of: data set ^op

denotator type^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000409

A denotator type indicates how a term should be interpreted from an ontological perspective.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Source: Barry Smith, Werner Ceusters

Example

The Basic Formal Ontology ontology makes a distinction between Universals and defined classes, where the formal are "natural kinds" and the latter arbitrary collections of entities.

is equivalent to: { universal ⁿⁱ , defined class ⁿⁱ , named class expression ⁿⁱ }
has super-classes: data about an ontology part ^c
has members: defined class ⁿⁱ, named class expression ⁿⁱ, universal ⁿⁱ

directive information entity^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000033

An information content entity whose concretizations indicate to their bearer how to realize them in a process.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Term status: http://purl.obolibrary.org/obo/IAO_0000122

has super-classes: information content entity ^c
has sub-classes: action specification ^c, media type ^c, objective specification ^c, plan specification ^c, source code module ^c

disposition^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000016

Is defined by: http://purl.obolibrary.org/obo/bfo.owl

Example

an atom of element X has the disposition to decay to an atom of element Y

certain people have a predisposition to colon cancer

children are innately disposed to categorize objects in certain ways.

the cell wall is disposed to filter chemicals in endocytosis and exocytosis

has super-classes: realizable entity ^c
has sub-classes: function ^c
is in range of: has disposition ^op
is disjoint with: role ^c

document^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000310

A collection of information content entities intended to be understood together as a whole

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Term status: http://purl.obolibrary.org/obo/IAO_0000120

Example

A journal article, patent application, laboratory notebook, or a book

has super-classes: information content entity ^c
has sub-classes: publication ^c, publication ^c

entity^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000001

Is defined by: http://purl.obolibrary.org/obo/bfo.owl

Example

Julius Caesar

Verdi’s Requiem

the Second World War

your body mass index

has sub-classes: continuant ^c, occurrent ^c
is in domain of: denoted by ^op
is in range of: denotes ^op

event^c back to ToC or Class ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/Event

An occurent that represents an occurence or happening that unfolds in time.

A class that represents entities that occur or unfold in time, typically characterized by a specific happening or occurrence with temporal properties. Events encompass a wide range of occurrences, including but not limited to happenings, incidents, activities, or processes.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Example

conferences, wars, strikes, celebrations, accidents, workshops, meetings, or any other specific incident or happening.

has super-classes: occurrent ^c
is in domain of: end date ^dp, start date ^dp

federal state^c back to ToC or Class ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/FederalState

A place that refers to a geographical territory forming part of a country.

A federal state where the thing is located.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Example

Sachsen, Berlin

has super-classes: place ^c
is in domain of: of country ^op
is in range of: of federal state ^op

function^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000034

Is defined by: http://purl.obolibrary.org/obo/bfo.owl

Example

the function of a hammer to drive in nails

the function of a heart pacemaker to regulate the beating of a heart through electricity

the function of amylase in saliva to break down starch into sugar

has super-classes: disposition ^c
is in domain of: function of ^op
is in range of: has function ^op

funding organization role^c back to ToC or Class ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/FundingOrganizationRole

A role inhering in an organization that is realized when the organization serves as a funder to endevaours, e.g. projects.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

has super-classes: role ^c

generically dependent continuant^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000031

b is a generically dependent continuant = Def. b is a continuant that g-depends_on one or more other entities. (axiom label in BFO2 Reference: [074-001])

Is defined by: http://purl.obolibrary.org/obo/bfo.owl

Example

The entries in your database are patterns instantiated as quality instances in your hard drive. The database itself is an aggregate of such patterns. When you create the database you create a particular instance of the generically dependent continuant type database. Each entry in the database is an instance of the generically dependent continuant type IAO: information content entity.

the pdf file on your laptop, the pdf file that is a copy thereof on my laptop

the sequence of this protein molecule; the sequence that is a copy thereof in that protein molecule.

has super-classes: continuant ^c
has sub-classes: information content entity ^c
is disjoint with: independent continuant ^c, specifically dependent continuant ^c

glossary^c back to ToC or Class ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/Glossary

Semantic expressivity that refers to a list of terms and their definitions within a specific domain or academic discipline.

A compilation of terms and their definitions within a specific domain or academic discipline.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Example

ICOM Museum Glossary

has super-classes: semantic expressivity ^c

immaterial entity^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000141

Is defined by: http://purl.obolibrary.org/obo/bfo.owl

has super-classes: independent continuant ^c
has sub-classes: site ^c, spatial region ^c
is disjoint with: material entity ^c

independent continuant^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000004

b is an independent continuant = Def. b is a continuant which is such that there is no c and no t such that b s-depends_on c at t. (axiom label in BFO2 Reference: [017-002])

Is defined by: http://purl.obolibrary.org/obo/bfo.owl

Example

a chair

a heart

a leg

a molecule

a spatial region

an atom

an orchestra.

an organism

the bottom right portion of a human torso

the interior of your mouth

has super-classes: continuant ^c
has sub-classes: agent ^c, immaterial entity ^c, material entity ^c
is in domain of: has disposition ^op, has function ^op, has role ^op, located in ^op
is in range of: located in ^op
is disjoint with: specifically dependent continuant ^c, generically dependent continuant ^c

information content entity^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000030

A generically dependent continuant that is about some thing.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Source: OBI_0000142; IAO

Term status: http://purl.obolibrary.org/obo/IAO_0000122

Example

Examples of information content entites include journal articles, data, graphical layouts, and graphs.

Examples of information content entites include journal articles, data, graphical layouts, and graphs.

has super-classes: generically dependent continuant ^c
has sub-classes: data item ^c, directive information entity ^c, document ^c, licence ^c, license ^c, resource ^c
is in domain of: denotes ^op, is about ^op
is in range of: denoted by ^op

libraries & APIs service^c back to ToC or Class ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/LibrariesAndAPIsService

Collection of pre-implemented functions for a specific task that can be accessed via a well-defined interface.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Source: https://doi.org/10.5281/zenodo.10101412

has super-classes: service ^c
is disjoint with: data curation service ^c, databases service ^c, storage service ^c, support & consulting service ^c, tools & applications service ^c, training service ^c, web applications service ^c, workflows & pipelines service ^c

licence^c back to ToC or Class ToC

IRI: http://www.ebi.ac.uk/swo/SWO_0000002

A licence is a legal instrument (usually by way of contract law, with or without printed material) governing the use or redistribution of the resource containing the licence.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Source: Modified from http://en.wikipedia.org/wiki/Software_license

is equivalent to: license ^c
has super-classes: information content entity ^c

license^c back to ToC or Class ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/License

An information content entity that refers to a legal instrument (usually by way of contract law, with or without printed material) governing the use or redistribution of the resource containing the licence.

A document that provides legal guidelines for the use of a resource, e.g. a software.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Example

cc-by-3, Digital Peer Publishing Lizenz

has super-classes: information content entity ^c
is in range of: has license ^op

material entity^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000040

An independent continuant that is spatially extended whose identity is independent of that of other entities and can be maintained through time.

Is defined by: http://purl.obolibrary.org/obo/bfo.owl

Example

a flame

a forest fire

a human being

a hurricane

a photon

a puff of smoke

a sea wave

a tornado

an aggregate of human beings.

an energy wave

an epidemic

the undetached arm of a human being

has super-classes: independent continuant ^c
has sub-classes: collection ^c
is disjoint with: immaterial entity ^c

media type^c back to ToC or Class ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/MediaType

A directive information entity that describes a media type a bearer has.

A digital resource format or physical medium.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Example

doc, avi, mpeg, epub, txt, MIME-type, record, cassette, VHS, LaserDiscs, CD, DVD, Blu-ray color lithograph, text book

has super-classes: directive information entity ^c
has sub-classes: MIME-type ^c
is in range of: has export format ^op, has media type ^op

MIME-type^c back to ToC or Class ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/MIME-Type

A media type that serves as a standardized identifier for specifying the nature and format of data.

The MIME-type template of the resource (see https://www.iana.org/assignments/media-types/media-types.xhtml)

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Example

https://www.iana.org/assignments/media-types/application/dicom, https://www.iana.org/assignments/media-types/video/mp4, https://www.iana.org/assignments/media-types/text/n3

has super-classes: media type ^c

objective specification^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000005

A directive information entity that describes an intended process endpoint. When part of a plan specification the concretization is realized in a planned process in which the bearer tries to effect the world so that the process endpoint is achieved.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Source: OBI Plan and Planned Process/Roles Branch; OBI_0000217

Term status: http://purl.obolibrary.org/obo/IAO_0000122

Example

In the protocol of a ChIP assay the objective specification says to identify protein and DNA interaction.

has super-classes: directive information entity ^c

obsolescence reason specification^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000225

The reason for which a term has been deprecated. The allowed values come from an enumerated list of predefined terms. See the specification of these instances for more detailed definitions of each enumerated value.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Term status: http://purl.obolibrary.org/obo/IAO_0000125

is equivalent to: { failed exploratory term ⁿⁱ , placeholder removed ⁿⁱ , terms merged ⁿⁱ , term imported ⁿⁱ , term split ⁿⁱ , out of scope ⁿⁱ }
has super-classes: data about an ontology part ^c
has members: failed exploratory term ⁿⁱ, out of scope ⁿⁱ, placeholder removed ⁿⁱ, term imported ⁿⁱ, term split ⁿⁱ, terms merged ⁿⁱ

occurrent^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000003

An entity that has temporal parts and that happens, unfolds or develops through time.

Is defined by: http://purl.obolibrary.org/obo/bfo.owl

has super-classes: entity ^c
has sub-classes: event ^c, process ^c
is in domain of: has participant ^op
is in range of: participates in ^op
is disjoint with: continuant ^c

ontology^c back to ToC or Class ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/Ontology

Semantic expressivity that refers to a semantic framework that represents knowledge about a domain, including concepts, entities, properties, and relationships, in a structured and machine-understandable manner.

A semantic framework that represents knowledge about a domain, including concepts, entities, properties, and relationships, in a structured and formalized manner, enabling machine-understandable reasoning and inference.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Example

CIDOC-CRM, BFO, nfdicore

has super-classes: semantic expressivity ^c

organization^c back to ToC or Class ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/Organization

An agent that refers to a group of individuals, which structures and coordinates the activities of individuals or groups toward achieving common goal within a defined framework.

An organization of some kind, e.g. research organization or business organization

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Example

University Library in Leipzig, Museums of City Cologne

has super-classes: agent ^c
has sub-classes: consortium member ^c
is in domain of: dissolution date ^dp, foundation date ^dp, funding organization of ^op
is in range of: has funding organization ^op

person^c back to ToC or Class ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/Person

An agent that represents a single human individual.

A resource that represents a single person.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Example

Harald Sack, Tabea Tietz, Sasha Bruns, Etienne Posthumus

has super-classes: agent ^c
is in domain of: birth date ^dp, death date ^dp

place^c back to ToC or Class ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/Place

A site that refers to geographical locations, such as cities, countries, landmarks, and natural environments.

A spatial region, e.g. country, city or district.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Example

Hessen, Berlin, Schweiz

has super-classes: site ^c
has sub-classes: city ^c, country ^c, federal state ^c

plan specification^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000104

A directive information entity with action specifications and objective specifications as parts, and that may be concretized as a realizable entity that, if realized, is realized in a process in which the bearer tries to achieve the objectives by taking the actions specified.

2/3/2009 Comment from OBI review. Action specification not well enough specified. Conditional specification not well enough specified. Question whether all plan specifications have objective specifications. Request that IAO either clarify these or change definitions not to use them

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Source: OBI Plan and Planned Process branch; OBI_0000344

Term status: http://purl.obolibrary.org/obo/IAO_0000122

Example

PMID: 18323827.Nat Med. 2008 Mar;14(3):226.New plan proposed to help resolve conflicting medical advice.

has super-classes: directive information entity ^c
has sub-classes: software ^c, software ^c, technological means ^c

planned process^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000011

A process that realizes a plan which is the concretization of a plan specification.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

has super-classes: process ^c
has sub-classes: contacting ^c, contributing ^c, project ^c, publishing process ^c, software development ^c
is in domain of: has_specified_output ^op
is in range of: is_specified_output_of ^op

process^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000015

p is a process = Def. p is an occurrent that has temporal proper parts and for some time t, p s-depends_on some material entity at t. (axiom label in BFO2 Reference: [083-003])

Is defined by: http://purl.obolibrary.org/obo/bfo.owl

Example

a process of cell-division, \ a beating of the heart

a process of meiosis

a process of sleeping

the course of a disease

the flight of a bird

the life of an organism

your process of aging.

has super-classes: occurrent ^c
has sub-classes: planned process ^c
is in domain of: realizes ^op
is in range of: realized in ^op

programming language^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000025

A language in which source code is written that is intended to be executed/run by a software interpreter. Programming languages are ways to write instructions that specify what to do, and sometimes, how to do it.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Source: OBI_0000058; group:OBI

Term status: http://purl.obolibrary.org/obo/IAO_0000120

Example

R, Perl, Java

is equivalent to: programming language ^c
has super-classes: technological means ^c

programming language^c back to ToC or Class ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/ProgrammingLanguage

A technological means that is used for implementing software.

A formal language used for implementing a software.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Example

Java, Ruby, C++, Perl, PHP

has super-classes: technological means ^c
is in range of: has programming language ^op

project^c back to ToC or Class ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/Project

A planned process of a scientific or business endeavor that aims to conclude an investigation or to answer a research question.

A scientific or business endeavor that aims to conclude an investigation or to answer a research question.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Example

Freischütz digital, Corpus Vitrearum Medii Aevi

has super-classes: planned process ^c
is in domain of: has contact point ^op, has funding organization ^op, has related project ^op, subject area ^op
is in range of: funding organization of ^op, has related project ^op

publication^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000311

A document that is the output of a publishing process.

Revisit the term in Octorber 2020. Improve the defintion.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Term status: http://purl.obolibrary.org/obo/IAO_0000120

Example

journal article, newspaper story, book, etc.

is equivalent to: publication ^c; document ^c and (is_specified_output_of ^op only publishing process ^c)
has super-classes: creative work ^c, document ^c

publication^c back to ToC or Class ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/Publication

A creative work that is the output of a publishing process.

A published scholarly work that reports on ongoing activity about or within a resource, e.g. a dataset.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Example

MusiXplora: Visual analysis of a musicological encyclopedia, Textkategorien in kompositorischen Werkstattdokumenten

has super-classes: creative work ^c, document ^c

publisher role^c back to ToC or Class ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/PublisherRole

A role inhering in an agent that is realized when the bearer participates in the publishing of the document.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

has super-classes: role ^c

publishing process^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000444

A planned process of making information, such as literature, music, and software etc., available to the public for sale or for free.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Source: https://en.wikipedia.org/wiki/Publishing

Term status: http://purl.obolibrary.org/obo/IAO_0000120

has super-classes: planned process ^c

quality^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000019

Is defined by: http://purl.obolibrary.org/obo/bfo.owl

Example

the ambient temperature of this portion of air

the color of a tomato

the length of the circumference of your waist

the mass of this piece of gold.

the shape of your nose

the shape of your nostril

has super-classes: specifically dependent continuant ^c
has sub-classes: academic discipline ^c, semantic expressivity ^c
is in range of: has quality ^op
is disjoint with: realizable entity ^c

realizable entity^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000017

A specifically dependent continuant that inheres in continuant entities and are not exhibited in full at every time in which it inheres in an entity or group of entities. The exhibition or actualization of a realizable entity is a particular manifestation, functioning or process that occurs under certain circumstances.

Is defined by: http://purl.obolibrary.org/obo/bfo.owl

Example

the disposition of this piece of metal to conduct electricity.

the disposition of your blood to coagulate

the function of your reproductive organs

the role of being a doctor

the role of this boundary to delineate where Utah and Colorado meet

has super-classes: specifically dependent continuant ^c
has sub-classes: disposition ^c, role ^c
is in domain of: realized in ^op
is in range of: realizes ^op
is disjoint with: quality ^c

resource^c back to ToC or Class ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/Resource

An information content entity that refers to digital creative works and services, and is utilized to organize the resources of NFDI.

The most generic kind of a resource and may be associated with any kind of digital creative work, e.g. datasets, collections, metadata; offered products and services, e.g. data portals, data curation, data digitization.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

has super-classes: information content entity ^c
has sub-classes: creative work ^c, service ^c
is in domain of: data set ^op, file extension ^dp, has best practice ^op, has contact point ^op, has contributor ^op, has export format ^op, has license ^op, has media type ^op, has publisher ^op, has related project ^op, has semantic expressivity ^op, has software ^op, has sparql endpoint ^op, has specification ^op, has standard ^op, has technology ^op, subject area ^op
is in range of: has sparql endpoint ^op

role^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000023

A realizable entity the manifestation of which brings about some result or end that is not essential to a continuant in virtue of the kind of thing that it is but that can be served or participated in by that kind of continuant in some kinds of natural, social or institutional contexts.

Is defined by: http://purl.obolibrary.org/obo/bfo.owl

Example

John’s role of husband to Mary is dependent on Mary’s role of wife to John, and both are dependent on the object aggregate comprising John and Mary as member parts joined together through the relational quality of being married.

the priest role

the role of a boundary to demarcate two neighboring administrative territories

the role of a building in serving as a military target

the role of a stone in marking a property boundary

the role of subject in a clinical trial

the student role

has super-classes: realizable entity ^c
has sub-classes: consortium member role ^c, contact point role ^c, contributor role ^c, funding organization role ^c, publisher role ^c
is in range of: has role ^op
is disjoint with: disposition ^c

semantic expressivity^c back to ToC or Class ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/SemanticExpressivity

A quality of a resource that defines the degree of expressivity in the semantic representation of a resource.

The class represents the degree of expressivity in the semantic representation of a resource, such as an ontology, taxonomy, or glossary. It specifies the extent to which the resource captures and conveys the meaning, relationships, and semantics of concepts within a knowledge domain.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Example

controlled vocabulary, ontology, taxonomy

has super-classes: quality ^c
has sub-classes: controlled vocabulary ^c, glossary ^c, ontology ^c, taxonomy ^c
is in range of: has semantic expressivity ^op

service^c back to ToC or Class ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/Service

An information content entity that refers to offerings provided by individuals or organizations to facilitate and contribute to the specific goals.

Services are resources offered by organizations or people to support and contribute to the predefined goals of a project. Services may encompass a diverse range of contributions such as data curation, specialized expertise, skill and various other forms of support.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Example

Data curation for HeiDATA, Expertise for the development and application of LIDO

is equivalent to: information content entity ^c and Service ^c
has super-classes: Service ^c, resource ^c
has sub-classes: data curation service ^c, databases service ^c, libraries & APIs service ^c, storage service ^c, support & consulting service ^c, tools & applications service ^c, training service ^c, web applications service ^c, workflows & pipelines service ^c

Service^c back to ToC or Class ToC

IRI: https://schema.org/Service

A service provided by an organization, e.g. delivery service, print services, etc.

Is defined by: https://schema.org/Service

has sub-classes: service ^c

site^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000029

Is defined by: http://purl.obolibrary.org/obo/bfo.owl

Example

Manhattan Canyon)

a hole in the interior of a portion of cheese

a rabbit hole

an air traffic control region defined in the airspace above an airport

the Grand Canyon

the Piazza San Marco

the cockpit of an aircraft

the hold of a ship

the interior of a kangaroo pouch

the interior of the trunk of your car

the interior of your bedroom

the interior of your office

the interior of your refrigerator

the lumen of your gut

your left nostril (a fiat part – the opening – of your left nasal cavity)

has super-classes: immaterial entity ^c
has sub-classes: place ^c
is disjoint with: spatial region ^c

software^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000010

Software is a plan specification composed of a series of instructions that can be interpreted by or directly executed by a processing unit.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Source: GROUP: OBI

Term status: http://purl.obolibrary.org/obo/IAO_0000120

is equivalent to: software ^c
has super-classes: creative work ^c, plan specification ^c

software^c back to ToC or Class ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/Software

A creative work that comprises a set of instructions, programs, or algorithms designed to perform specific tasks or functions on a computer or other electronic devices.

A computer software provided by an organization or a person.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Example

Edirom, Muscat

has super-classes: creative work ^c, plan specification ^c
is in domain of: has programming language ^op
is in range of: has software ^op

software development^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/APOLLO_SV_00000008

A planned process that has specified output a software product and that involves the creation of source code.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Source: http://en.wikipedia.org/wiki/Software_development

is equivalent to: planned process ^c and (has_specified_output ^op some software ^c or source code module ^c)
has super-classes: planned process ^c

source code module^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000096

A source code module is a directive information entity that specifies, using a programming language, some algorithm.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Source: OBI_0000039; group:OBI

Term status: http://purl.obolibrary.org/obo/IAO_0000123

Example

The written source code that implements part of an algorithm. Test - if you know that it was written in a specific language, then it can be source code module. We mean here, roughly, the wording of a document such as a perl script.

has super-classes: directive information entity ^c

spatial region^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000006

Is defined by: http://purl.obolibrary.org/obo/bfo.owl

has super-classes: immaterial entity ^c
is disjoint with: site ^c

specifically dependent continuant^c back to ToC or Class ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000020

b is a specifically dependent continuant = Def. b is a continuant & there is some independent continuant c which is not a spatial region and which is such that b s-depends_on c at every time t during the course of b’s existence. (axiom label in BFO2 Reference: [050-003])

Is defined by: http://purl.obolibrary.org/obo/bfo.owl

Example

Reciprocal specifically dependent continuants: the function of this key to open this lock and the mutually dependent disposition of this lock: to be opened by this key

of one-sided specifically dependent continuants: the mass of this tomato

of relational dependent continuants (multiple bearers): John’s love for Mary, the ownership relation between John and this statue, the relation of authority between John and his subordinates.

the disposition of this fish to decay

the function of this heart: to pump blood

the mutual dependence of proton donors and acceptors in chemical reactions [79

the mutual dependence of the role predator and the role prey as played by two organisms in a given interaction

the pink color of a medium rare piece of grilled filet mignon at its center

the role of being a doctor

the shape of this hole.

the smell of this portion of mozzarella

has super-classes: continuant ^c
has sub-classes: quality ^c, realizable entity ^c
is in range of: has characteristic ^op
is disjoint with: independent continuant ^c, generically dependent continuant ^c

specification^c back to ToC or Class ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/Specification

A creative work that defines the requirements, characteristics, or standards for the design, implementation, or operation of a system, product, or process.

A set of requirements, guidelines, standards contributed by an organization or a person.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Example

Guidelines, technical specifications, design specifications

has super-classes
has sub-classes: standard ^c
is in range of: has best practice ^op, has specification ^op

standard^c back to ToC or Class ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/Standard

A specification that establishes a set of guidelines, criteria, or norms recognized and adopted by internationational community.

An international standard and norm that can be used to evaluate or create a resource.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Example

ISO 15511, DINI-Zertifikat

has super-classes: specification ^c
is in range of: has standard ^op

storage service^c back to ToC or Class ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/StorageService

Provision of storage space for research data as a service to external users. Access is possible via web protocols.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Source: https://doi.org/10.5281/zenodo.10101412

has super-classes: service ^c
is disjoint with: data curation service ^c, databases service ^c, libraries & APIs service ^c, support & consulting service ^c, tools & applications service ^c, training service ^c, web applications service ^c, workflows & pipelines service ^c

support & consulting service^c back to ToC or Class ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/SupportAndConsultingService

Service with direct user contact for topics going beyond the support for specific single services.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Source: https://doi.org/10.5281/zenodo.10101412

has super-classes: service ^c
is disjoint with: data curation service ^c, databases service ^c, libraries & APIs service ^c, storage service ^c, tools & applications service ^c, training service ^c, web applications service ^c, workflows & pipelines service ^c

taxonomy^c back to ToC or Class ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/Taxonomy

Semantic expressivity that refers to a hierarchical classification system that organizes concepts into a tree-like structure.

A hierarchical classification system that organizes concepts into a tree-like structure based on their shared characteristics and relationships.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Example

Linnaean Taxonomy, Iconclass

has super-classes: semantic expressivity ^c

technological means^c back to ToC or Class ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/TechnologicalMeans

A plan specification that refers to technology employed for the creation, management, utilization, or control of a resource.

A technology, e.g. a web application or a programming framework used in a resource.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Example

Groovy on Grails, Angular

has super-classes: plan specification ^c
has sub-classes: programming language ^c, programming language ^c
is in range of: has technology ^op

thesaurus^c back to ToC or Class ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/Thesaurus

A controlled vocabulary organized hierarchically and provided with associative relationships, such as synonyms, broader terms, and narrower terms.

A hierarchical controlled vocabulary enriched with associative relationships, including synonyms, broader terms, and narrower terms.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Example

Getty Art & Architecture Thesaurus, UNESCO Thesaurus for cultural and scientific documentation

has super-classes: controlled vocabulary ^c

tools & applications service^c back to ToC or Class ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/ToolsAndApplicationsService

Software that can be downloaded and executed locally on the users' hardware.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Source: https://doi.org/10.5281/zenodo.10101412

has super-classes: service ^c
is disjoint with: data curation service ^c, databases service ^c, libraries & APIs service ^c, storage service ^c, support & consulting service ^c, training service ^c, web applications service ^c, workflows & pipelines service ^c

training service^c back to ToC or Class ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/TrainingService

Standalone training for self-study can be considered a technical service (usually a web application). Generally speaking, training materials often come in the form of specific measures or tutorials that are attached to a service and that are designed to improve the user’s service experience. Our joint understanding of training as a stand-alone service, however, is not limited to the above and includes materials designed for education in all fields of research data management.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Source: https://doi.org/10.5281/zenodo.10101412

has super-classes: service ^c
is disjoint with: data curation service ^c, databases service ^c, libraries & APIs service ^c, storage service ^c, support & consulting service ^c, tools & applications service ^c, web applications service ^c, workflows & pipelines service ^c

web applications service^c back to ToC or Class ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/WebApplicationsService

Software that is installed on a server and can be used by users via a web page and the internet, for example Software-as-a-service (SaaS).

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Source: https://doi.org/10.5281/zenodo.10101412

has super-classes: service ^c
is disjoint with: data curation service ^c, databases service ^c, libraries & APIs service ^c, storage service ^c, support & consulting service ^c, tools & applications service ^c, training service ^c, workflows & pipelines service ^c

website^c back to ToC or Class ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/Website

A creative work that represents a collection of interconnected web pages, multimedia content, and digital resources accessible via the World Wide Web.

A collection of webpages contributed by an organization or a person.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Example

https:\/\/opac.rism.info

has super-classes: creative work ^c
has sub-classes: data portal ^c

workflows & pipelines service^c back to ToC or Class ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/WorkflowsAndPipelinesService

Software that combines multiple tools/applications. They may be used locally or remotely via the internet.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Source: https://doi.org/10.5281/zenodo.10101412

has super-classes: service ^c
is disjoint with: data curation service ^c, databases service ^c, libraries & APIs service ^c, storage service ^c, support & consulting service ^c, tools & applications service ^c, training service ^c, web applications service ^c

Object Properties

best practice of
characteristic of
contact point of
contributor of
country of
data set
data set of
denoted by
denotes
disposition of
export format of
federal state of
function of
funding organization of
has best practice
has characteristic
has contact point
has contributor
has disposition
has export format
has function
has funding organization
has license
has location
has media type
has parent organization
has part
has part
has participant
has participant
has partner organization
has programming language
has publisher
has quality
has related project
has role
has semantic expressivity
has software
has sparql endpoint
has specification
has standard
has subsidiary organization
has technology
has_specified_output
is about
is encoded in
is_specified_output_of
license of
located in
location of
location of
media type of
member
member of
of country
of federal state
part of
part of
participant of
participates in
programming language of
publisher of
quality of
realized in
realizes
represented collection
represented collection of
role of
semantic expressivity of
software of
sparql endpoint of
specification of
standard of
subject area
subject area of
technology of
url
url of

best practice of^op back to ToC or Object Property ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/bestPracticeOf

inverse of property "best practice"

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

is inverse of: has best practice ^op

characteristic of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0000052

a relation between a specifically dependent continuant (the characteristic) and any other entity (the bearer), in which the characteristic depends on the bearer for its existence.

Note that this relation was previously called "inheres in", but was changed to be called "characteristic of" because BFO2 uses "inheres in" in a more restricted fashion. This relation differs from BFO2:inheres_in in two respects: (1) it does not impose a range constraint, and thus it allows qualities of processes, as well as of information entities, whereas BFO2 restricts inheres_in to only apply to independent continuants (2) it is declared functional, i.e. something can only be a characteristic of one thing.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Example

this fragility is a characteristic of this vase

this red color is a characteristic of this apple

has characteristics: functional

has sub-properties: disposition of ^op, function of ^op, quality of ^op, role of ^op
is inverse of: has characteristic ^op

contact point of^op back to ToC or Object Property ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/contactPointOf

inverse of property "contact point"

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

is inverse of: has contact point ^op

contributor of^op back to ToC or Object Property ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/contributorOf

inverse of property "contributor"

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

is inverse of: has contributor ^op

country of^op back to ToC or Object Property ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/countryOf

inverse of property "country"

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

has super-properties: has part ^op
is inverse of: of country ^op

data set^op back to ToC or Object Property ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/dataset

The property is a relation between a resource and a data set.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

has super-properties: denotes ^op
has domain: resource ^c
has range: dataset ^c
is inverse of: data set of ^op

data set of^op back to ToC or Object Property ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/datasetOf

inverse of property "data set"

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

has super-properties: is about ^op
is inverse of: data set ^op

denoted by^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000235

inverse of the relation 'denotes'

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

has sub-properties: represented collection of ^op, url ^op
has domain: entity ^c
has range: information content entity ^c
is inverse of: denotes ^op

denotes^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000219

A primitive, instance-level, relation obtaining between an information content entity and some portion of reality. Denotation is what happens when someone creates an information content entity E in order to specifically refer to something. The only relation between E and the thing is that E can be used to 'pick out' the thing. This relation connects those two together. Freedictionary.com sense 3: To signify directly; refer to specifically

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Source: Conversations with Barry Smith, Werner Ceusters, Bjoern Peters, Michel Dumontier, Melanie Courtot, James Malone, Bill Hogan

Example

A person's name denotes the person. A variable name in a computer program denotes some piece of memory. Lexically equivalent strings can denote different things, for instance "Alan" can denote different people. In each case of use, there is a case of the denotation relation obtaining, between "Alan" and the person that is being named.

has super-properties: is about ^op
has sub-properties: data set ^op, represented collection ^op, url of ^op
has domain: information content entity ^c
has range: entity ^c
is inverse of: denoted by ^op

disposition of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0000092

This relation is modeled after the BFO relation of the same name which was in BFO2, but is used in a more restricted sense - specifically, we model this relation as functional (inherited from characteristic-of). Note that this relation is now removed from BFO2020.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

has super-properties: characteristic of ^op
is inverse of: has disposition ^op

export format of^op back to ToC or Object Property ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/exportFormatOf

inverse of property "export format"

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

is inverse of: has export format ^op

federal state of^op back to ToC or Object Property ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/federalStateOf

inverse of property "federal state"

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

has super-properties: has part ^op
is inverse of: of federal state ^op

function of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0000079

a relation between a function and an independent continuant (the bearer), in which the function specifically depends on the bearer for its existence

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Example

this catalysis function is a function of this enzyme

has super-properties: characteristic of ^op
has domain: function ^c
is inverse of: has function ^op

funding organization of^op back to ToC or Object Property ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/fundingOrganizationOf

inverse of property "funding organization"

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

has domain: organization ^c
has range: project ^c
is inverse of: has funding organization ^op

has best practice^op back to ToC or Object Property ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/bestPractice

The property is a relationship between a resource and the specified best practice.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

has domain: resource ^c
has range: specification ^c
is inverse of: best practice of ^op

has characteristic^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0000053

Inverse of characteristic_of

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Example

this apple is bearer of this red color

this vase is bearer of this fragility

has characteristics: inverse functional

has sub-properties: has disposition ^op, has function ^op, has quality ^op, has role ^op
has range: specifically dependent continuant ^c
is inverse of: characteristic of ^op

has contact point^op back to ToC or Object Property ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/contactPoint

The property is a relationship between a resource and a contact point.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

has domain: project ^c or resource ^c
has range: agent ^c
is inverse of: contact point of ^op

has contributor^op back to ToC or Object Property ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/contributor

The property related a resource to a person or an organization responsible for making contributions to a resource.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

has domain: resource ^c
has range: agent ^c
is inverse of: contributor of ^op

has disposition^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0000091

a relation between an independent continuant (the bearer) and a disposition, in which the disposition specifically depends on the bearer for its existence

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

has super-properties: has characteristic ^op
has domain: independent continuant ^c
has range: disposition ^c
is inverse of: disposition of ^op

has export format^op back to ToC or Object Property ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/exportFormat

The property relates a resource to the format available for the export of a resource.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

has domain: resource ^c
has range: media type ^c
is inverse of: export format of ^op

has function^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0000085

a relation between an independent continuant (the bearer) and a function, in which the function specifically depends on the bearer for its existence

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Example

this enzyme has function this catalysis function (more colloquially: this enzyme has this catalysis function)

has super-properties: has characteristic ^op
has domain: independent continuant ^c
has range: function ^c
is inverse of: function of ^op

has funding organization^op back to ToC or Object Property ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/fundingOrganization

The property relates a project to the organization that provided funding for it.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

has domain: project ^c
has range: organization ^c
is inverse of: funding organization of ^op

has license^op back to ToC or Object Property ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/license

The property is a relationship between a resource and a license file.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

has super-properties: is about ^op
has domain: resource ^c
has range: license ^c
is inverse of: license of ^op

has location^op back to ToC or Object Property ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/location

The property is a relationship between a thing and a place its located at.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

has equivalent properties: located in ^op
is inverse of: location of ^op

has media type^op back to ToC or Object Property ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/mediaType

The property relates a resource to its data format.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

has domain: resource ^c
has range: media type ^c
is inverse of: media type of ^op

has parent organization^op back to ToC or Object Property ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/parentOrganization

The property is a parental relationship between organizations.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

is inverse of: has subsidiary organization ^op

has part^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000051

a core relation that holds between a whole and its part

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Example

my body has part my brain (continuant parthood, two material entities)

my stomach has part my stomach cavity (continuant parthood, material entity has part immaterial entity)

this year has part this day (occurrent parthood)

has characteristics: transitive

has equivalent properties: has part ^op
is inverse of: part of ^op

has part^op back to ToC or Object Property ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/part

The generic property is a relationship between a thing and its part.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

has equivalent properties: has part ^op
has sub-properties: country of ^op, federal state of ^op, member ^op
is inverse of: part of ^op

has participant^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0000057

a relation between a process and a continuant, in which the continuant is somehow involved in the process

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Example

this blood coagulation has participant this blood clot

this investigation has participant this investigator

this process has participant this input material (or this output material)

has equivalent properties: has participant ^op
has sub-properties: has_specified_output ^op
has domain: occurrent ^c
has range: continuant ^c
is inverse of: participates in ^op

has participant^op back to ToC or Object Property ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/participant

The property is a relationship between a project and an agent that participates in the project.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

has equivalent properties: has participant ^op
is inverse of: participant of ^op

has partner organization^op back to ToC or Object Property ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/partnerOrganization

The property is a partner relationship between organizations. The property is symmetric.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

has programming language^op back to ToC or Object Property ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/programmingLanguage

The property links software to a programming language its written in.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

has super-properties: is encoded in ^op
has domain: software ^c
has range: programming language ^c
is inverse of: programming language of ^op

has publisher^op back to ToC or Object Property ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/publisher

The property is a relationship between a resource and an organization or a person responsible for publishing it.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

has domain: resource ^c
has range: agent ^c
is inverse of: publisher of ^op

has quality^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0000086

a relation between an independent continuant (the bearer) and a quality, in which the quality specifically depends on the bearer for its existence

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Example

this apple has quality this red color

has super-properties: has characteristic ^op
has sub-properties: has semantic expressivity ^op, subject area ^op
has range: quality ^c
is inverse of: quality of ^op

has related project^op back to ToC or Object Property ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/relatedProject

The property is a relationship between a project or a resource and related projects.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

has domain: project ^c or resource ^c
has range: project ^c

has role^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0000087

a relation between an independent continuant (the bearer) and a role, in which the role specifically depends on the bearer for its existence

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Example

this person has role this investigator role (more colloquially: this person has this role of investigator)

has super-properties: has characteristic ^op
has domain: independent continuant ^c
has range: role ^c
is inverse of: role of ^op

has semantic expressivity^op back to ToC or Object Property ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/semanticExpressivity

The property relates a resource to its semantic expressivity spectrum.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

has super-properties: has quality ^op
has domain: resource ^c
has range: semantic expressivity ^c
is inverse of: semantic expressivity of ^op

has software^op back to ToC or Object Property ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/software

The property is a relationship between a resource and a software it uses.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

has domain: resource ^c
has range: software ^c
is inverse of: software of ^op

has sparql endpoint^op back to ToC or Object Property ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/sparqlEndpoint

The property relates a data resource to its SPARQL Endpoint.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

has domain: resource ^c
has range: resource ^c
is inverse of: sparql endpoint of ^op

has specification^op back to ToC or Object Property ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/specification

The property is a relationship between a resource and the international standard or norm.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

has domain: resource ^c
has range: specification ^c
is inverse of: specification of ^op

has standard^op back to ToC or Object Property ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/standard

The property relates a resource to the standard it relies on.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

has domain: resource ^c
has range: standard ^c
is inverse of: standard of ^op

has subsidiary organization^op back to ToC or Object Property ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/subsidiaryOrganization

inverse of "parent organization"

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

is inverse of: has parent organization ^op

has technology^op back to ToC or Object Property ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/technology

The property is a relationship between a resource and a technology it uses.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

has domain: resource ^c
has range: technological means ^c
is inverse of: technology of ^op

has_specified_output^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000299

The inverse property of is_specified_output_of

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Term status: http://purl.obolibrary.org/obo/IAO_0000122

has super-properties: has participant ^op
has domain: planned process ^c

is about^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000136

A (currently) primitive relation that relates an information artifact to an entity.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Source: Smith, Ceusters, Ruttenberg, 2000 years of philosophy; IAO; James Malone

Term status: http://purl.obolibrary.org/obo/IAO_0000125

Example

This document is about information artifacts and their representations

has super-properties: top Object Property ^op
has sub-properties: data set of ^op, denotes ^op, has license ^op, is encoded in ^op, license of ^op, media type of ^op, software of ^op, sparql endpoint of ^op, specification of ^op, standard of ^op, technology of ^op
has domain: information content entity ^c

is encoded in^op back to ToC or Object Property ToC

IRI: http://www.ebi.ac.uk/swo/SWO_0000741

Is encoded in is an "is about" relationship which describes the type of encoding used for the referenced class.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Source: Allyson Lister

Example

Linking a type of software to its particular programming language.

has super-properties: is about ^op
has sub-properties: has programming language ^op

is_specified_output_of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/OBI_0000312

A relation between a planned process and a continuant participating in that process. The presence of the continuant at the end of the process is explicitly specified in the objective specification which the process realizes the concretization of.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Term status: http://purl.obolibrary.org/obo/IAO_0000122

has super-properties: participates in ^op
has range: planned process ^c

license of^op back to ToC or Object Property ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/licenseOf

inverse of property "license"

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

has super-properties: is about ^op
is inverse of: has license ^op

located in^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0001025

a relation between two independent continuants, the target and the location, in which the target is entirely within the location

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Example

my brain is located in my head

this rat is located in this cage

has characteristics: transitive

has equivalent properties: has location ^op
has domain: independent continuant ^c; independent continuant ^c and (not (spatial region ^c))
has range: independent continuant ^c; independent continuant ^c and (not (spatial region ^c))
is inverse of: location of ^op

location of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0001015

a relation between two independent continuants, the location and the target, in which the target is entirely within the location

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Example

my head is the location of my brain

this cage is the location of this rat

has characteristics: transitive

has equivalent properties: location of ^op
is inverse of: located in ^op

location of^op back to ToC or Object Property ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/locationOf

inverse of property "location"

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

has equivalent properties: location of ^op
is inverse of: has location ^op

media type of^op back to ToC or Object Property ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/mediaTypeOf

inverse of property "media type"

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

has super-properties: is about ^op
is inverse of: has media type ^op

member^op back to ToC or Object Property ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/member

The property is a relationship between a consortium and an organization that is a member of the consortium.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

has super-properties: has part ^op
is inverse of: member of ^op

member of^op back to ToC or Object Property ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/memberOf

The property is a relationship between an organization and a consortium it belongs to.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

has super-properties: part of ^op
is inverse of: member ^op

of country^op back to ToC or Object Property ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/country

The property relates a city or a state to a country where it is located.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

has super-properties: part of ^op
has domain: city ^c or federal state ^c
has range: country ^c
is inverse of: country of ^op

of federal state^op back to ToC or Object Property ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/federalState

The property relates a city to a federal state where it is located.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

has super-properties: part of ^op
has domain: city ^c
has range: federal state ^c
is inverse of: federal state of ^op

part of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000050

a core relation that holds between a part and its whole

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Example

my brain is part of my body (continuant parthood, two material entities)

my stomach cavity is part of my stomach (continuant parthood, immaterial entity is part of material entity)

this day is part of this year (occurrent parthood)

has characteristics: transitive

has equivalent properties: part of ^op
is inverse of: has part ^op

part of^op back to ToC or Object Property ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/partOf

The generic property is a relationship between a thing and a thing in which it is physically or logically included.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

has equivalent properties: part of ^op
has sub-properties: member of ^op, of country ^op, of federal state ^op
is inverse of: has part ^op

participant of^op back to ToC or Object Property ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/participantOf

inverse of property "participant"

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

has equivalent properties: participates in ^op
is inverse of: has participant ^op

participates in^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0000056

a relation between a continuant and a process, in which the continuant is somehow involved in the process

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Example

this blood clot participates in this blood coagulation

this input material (or this output material) participates in this process

this investigator participates in this investigation

has equivalent properties: participant of ^op
has sub-properties: is_specified_output_of ^op
has domain: continuant ^c
has range: occurrent ^c
is inverse of: has participant ^op

programming language of^op back to ToC or Object Property ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/programmingLanguageOf

inverse of property "programming language"

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

is inverse of: has programming language ^op

publisher of^op back to ToC or Object Property ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/publisherOf

inverse of property "publisher"

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

is inverse of: has publisher ^op

quality of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0000080

a relation between a quality and an independent continuant (the bearer), in which the quality specifically depends on the bearer for its existence

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Example

this red color is a quality of this apple

has super-properties: characteristic of ^op
has sub-properties: semantic expressivity of ^op, subject area of ^op
is inverse of: has quality ^op

realized in^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000054

Paraphrase of elucidation: a relation between a realizable entity and a process, where there is some material entity that is bearer of the realizable entity and participates in the process, and the realizable entity comes to be realized in the course of the process

Is defined by: http://purl.obolibrary.org/obo/bfo.owl

Example

this disease is realized in this disease course

this fragility is realized in this shattering

this investigator role is realized in this investigation

has domain: realizable entity ^c
has range: process ^c
is inverse of: realizes ^op

realizes^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000055

Paraphrase of elucidation: a relation between a process and a realizable entity, where there is some material entity that is bearer of the realizable entity and participates in the process, and the realizable entity comes to be realized in the course of the process

Is defined by: http://purl.obolibrary.org/obo/iao.owl

Example

this disease course realizes this disease

this investigation realizes this investigator role

this shattering realizes this fragility

has domain: process ^c
has range: realizable entity ^c
is inverse of: realized in ^op

represented collection^op back to ToC or Object Property ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/representedCollection

The property is a relationship between a dataset and a collection it represents.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

has super-properties: denotes ^op
has domain: data portal ^c or dataset ^c
has range: collection ^c
is inverse of: represented collection of ^op

represented collection of^op back to ToC or Object Property ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/representedCollectionOf

inverse of property "represented collection"

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

has super-properties: denoted by ^op
is inverse of: represented collection ^op

role of^op back to ToC or Object Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0000081

a relation between a role and an independent continuant (the bearer), in which the role specifically depends on the bearer for its existence

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Example

this investigator role is a role of this person

has super-properties: characteristic of ^op
is inverse of: has role ^op

semantic expressivity of^op back to ToC or Object Property ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/semanticExpressivityOf

inverse of property "semantic expressivity"

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

has super-properties: quality of ^op
is inverse of: has semantic expressivity ^op

software of^op back to ToC or Object Property ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/softwareOf

inverse of property "sofware"

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

has super-properties: is about ^op
is inverse of: has software ^op

sparql endpoint of^op back to ToC or Object Property ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/sparqlEndpointOf

inverse of property "sparql endpoint"

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

has super-properties: is about ^op
is inverse of: has sparql endpoint ^op

specification of^op back to ToC or Object Property ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/specificationOf

inverse of property "specification"

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

has super-properties: is about ^op
is inverse of: has specification ^op

standard of^op back to ToC or Object Property ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/standardOf

inverse of property "standard"

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

has super-properties: is about ^op
is inverse of: has standard ^op

subject area^op back to ToC or Object Property ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/subjectArea

The property establishes a connection between a resource, an agent, or a project, and the academic discipline, subject area, or domain within which they operate.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

has super-properties: has quality ^op
has domain: agent ^c or project ^c or resource ^c
has range: academic discipline ^c
is inverse of: subject area of ^op

subject area of^op back to ToC or Object Property ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/subjectAreaOf

inverse of property "subject area"

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

has super-properties: quality of ^op
is inverse of: subject area ^op

technology of^op back to ToC or Object Property ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/technologyOf

inverse of property "technology"

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

has super-properties: is about ^op
is inverse of: has technology ^op

url^op back to ToC or Object Property ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/url

The property is a relationship between a thing and a url associated with the thing.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

has super-properties: denoted by ^op
has domain: Thing ^c
has range: Thing ^c
is inverse of: url of ^op

url of^op back to ToC or Object Property ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/urlOf

inverse of property "url"

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

has super-properties: denotes ^op
is inverse of: url ^op

birth date^dp back to ToC or Data Property ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/birthDate

The property refers to the date on which a person was born.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

has domain: person ^c
has range: Literal

death date^dp back to ToC or Data Property ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/deathDate

The property refers to the date on which a person passed away.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

has domain: person ^c
has range: Literal

dissolution date^dp back to ToC or Data Property ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/dissolutionDate

The property refers to the date on which the organization ceased to exist or was formally dissolved.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

has domain: organization ^c
has range: Literal

email address^dp back to ToC or Data Property ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/emailAddress

The property relates an agent to their email address.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

has domain: agent ^c
has range: Literal

end date^dp back to ToC or Data Property ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/endDate

The property refers to the moment in time when an event ends.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

has domain: event ^c
has range: Literal

file extension^dp back to ToC or Data Property ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/fileExtension

An identifier for a file format (e.g. txt for a text file) used as a suffix to the file name, don't use dot at start.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Example

mp4

ttl

txt

xml

has domain: resource ^c

foundation date^dp back to ToC or Data Property ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/foundationDate

The property refers to the specific date on which the organization was officially established or founded.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

has domain: organization ^c
has range: Literal

start date^dp back to ToC or Data Property ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/startDate

The property refers to the moment in time when an event begins.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

has domain: event ^c
has range: Literal

Annotation Properties

abstract^ap back to ToC or Annotation Property ToC

IRI: http://purl.org/dc/terms/abstract

B F O 0000179^ap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000179

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

B F O 0000180^ap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/BFO_0000180

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

bibliographic Citation^ap back to ToC or Annotation Property ToC

IRI: http://purl.org/dc/terms/bibliographicCitation

contributor^ap back to ToC or Annotation Property ToC

IRI: http://purl.org/dc/elements/1.1/contributor

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

created^ap back to ToC or Annotation Property ToC

IRI: http://purl.org/dc/terms/created

creator^ap back to ToC or Annotation Property ToC

IRI: http://purl.org/dc/terms/creator

curator note^ap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000232

An administrative note of use for a curator but of no use for a user

Is defined by: http://purl.obolibrary.org/obo/iao.owl

Term status: http://purl.obolibrary.org/obo/IAO_0000122

default Language^ap back to ToC or Annotation Property ToC

IRI: http://protege.stanford.edu/plugins/owl/protege#defaultLanguage

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

definition^ap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000115

The official OBI definition, explaining the meaning of a class or property. Shall be Aristotelian, formalized and normalized. Can be augmented with colloquial definitions.

Is defined by: http://purl.obolibrary.org/obo/iao.owl

Source: GROUP:OBI:<http://purl.obolibrary.org/obo/obi>

Term status: http://purl.obolibrary.org/obo/IAO_0000122

definition^ap back to ToC or Annotation Property ToC

IRI: http://www.w3.org/2004/02/skos/core#definition

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

definition source^ap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000119

Formal citation, e.g. identifier in external database to indicate / attribute source(s) for the definition. Free text indicate / attribute source(s) for the definition. EXAMPLE: Author Name, URI, MeSH Term C04, PUBMED ID, Wiki uri on 31.01.2007

Is defined by: http://purl.obolibrary.org/obo/iao.owl

Source: Discussion on obo-discuss mailing-list, see http://bit.ly/hgm99w; GROUP:OBI:<http://purl.obolibrary.org/obo/obi>

Term status: http://purl.obolibrary.org/obo/IAO_0000122

description^ap back to ToC or Annotation Property ToC

IRI: http://purl.org/dc/elements/1.1/description

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

description^ap back to ToC or Annotation Property ToC

IRI: http://purl.org/dc/terms/description

editor note^ap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000116

An administrative note intended for its editor. It may not be included in the publication version of the ontology, so it should contain nothing necessary for end users to understand the ontology.

Is defined by: http://purl.obolibrary.org/obo/iao.owl

Source: GROUP:OBI:<http://purl.obofoundry.org/obo/obi>

Term status: http://purl.obolibrary.org/obo/IAO_0000122

editor preferred label^ap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000111

The concise, meaningful, and human-friendly name for a class or property preferred by the ontology developers. (US-English)

Is defined by: http://purl.obolibrary.org/obo/iao.owl

Source: GROUP:OBI:<http://purl.obolibrary.org/obo/obi>

Term status: http://purl.obolibrary.org/obo/IAO_0000122

example^ap back to ToC or Annotation Property ToC

IRI: http://www.w3.org/2004/02/skos/core#example

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

example of usage^ap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000112

A phrase describing how a term should be used and/or a citation to a work which uses it. May also include other kinds of examples that facilitate immediate understanding, such as widely know prototypes or instances of a class, or cases where a relation is said to hold.

Is defined by: http://purl.obolibrary.org/obo/iao.owl

Source: GROUP:OBI:<http://purl.obolibrary.org/obo/obi>; IAO

Term status: http://purl.obolibrary.org/obo/IAO_0000122

feature^ap back to ToC or Annotation Property ToC

IRI: http://rdfs.org/ns/void#feature

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

format^ap back to ToC or Annotation Property ToC

IRI: http://purl.org/dc/terms/format

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

has Version^ap back to ToC or Annotation Property ToC

IRI: http://purl.org/dc/terms/hasVersion

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

I A O 0000114^ap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000114

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

I A O 0000118^ap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000118

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

I A O 0000233^ap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000233

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

I A O 0000234^ap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000234

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

I A O 0000412^ap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000412

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

I A O 0000600^ap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000600

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

I A O 0000601^ap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000601

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

I A O 0000602^ap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000602

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

I A O 0010000^ap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/IAO_0010000

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

is Defined By^ap back to ToC or Annotation Property ToC

IRI: http://www.w3.org/2000/01/rdf-schema#isDefinedBy

is Rule Enabled^ap back to ToC or Annotation Property ToC

IRI: http://swrl.stanford.edu/ontologies/3.3/swrla.owl#isRuleEnabled

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

label^ap back to ToC or Annotation Property ToC

IRI: http://www.w3.org/2000/01/rdf-schema#label

license^ap back to ToC or Annotation Property ToC

IRI: http://purl.org/dc/terms/license

modified^ap back to ToC or Annotation Property ToC

IRI: http://purl.org/dc/terms/modified

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

nfdicore:acronym^ap back to ToC or Annotation Property ToC

IRI: https://nfdi.fiz-karlsruhe.de/ontology/acronym

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

preferred Namespace Prefix^ap back to ToC or Annotation Property ToC

IRI: http://purl.org/vocab/vann/preferredNamespacePrefix

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

preferred Namespace Uri^ap back to ToC or Annotation Property ToC

IRI: http://purl.org/vocab/vann/preferredNamespaceUri

R O 0001900^ap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/RO_0001900

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

source^ap back to ToC or Annotation Property ToC

IRI: http://purl.org/dc/elements/1.1/source

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

status^ap back to ToC or Annotation Property ToC

IRI: http://purl.org/ontology/bibo/status

term editor^ap back to ToC or Annotation Property ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000117

Name of editor entering the term in the file. The term editor is a point of contact for information regarding the term. The term editor may be, but is not always, the author of the definition, which may have been worked upon by several people

Is defined by: http://purl.obolibrary.org/obo/iao.owl

Source: GROUP:OBI:<http://purl.obolibrary.org/obo/obi>

Term status: http://purl.obolibrary.org/obo/IAO_0000122

title^ap back to ToC or Annotation Property ToC

IRI: http://purl.org/dc/elements/1.1/title

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

title^ap back to ToC or Annotation Property ToC

IRI: http://purl.org/dc/terms/title

Named Individuals

defined class
example to be eventually removed
failed exploratory term
metadata complete
metadata incomplete
named class expression
organizational term
out of scope
pending final vetting
placeholder removed
ready for release
requires discussion
term imported
term split
terms merged
to be replaced with external ontology term
uncurated
universal

defined classⁿⁱ back to ToC or Named Individual ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000420

A defined class is a class that is defined by a set of logically necessary and sufficient conditions but is not a universal

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

belongs to: denotator type ^c
has facts: editor preferred term ^ap "defined class"@en; definition ^ap "A defined class is a class that is defined by a set of logically necessary and sufficient conditions but is not a universal"@en; editor note ^ap ""definitions", in some readings, always are given by necessary and sufficient conditions. So one must be careful (and this is difficult sometimes) to distinguish between defined classes and universal."@en; term editor ^ap "Alan Ruttenberg"@en

example to be eventually removedⁿⁱ back to ToC or Named Individual ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000002

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

belongs to: curation status specification ^c
has facts: editor preferred term ^ap "example to be eventually removed"@en

failed exploratory termⁿⁱ back to ToC or Named Individual ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000103

The term was used in an attempt to structure part of the ontology but in retrospect failed to do a good job

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

belongs to: obsolescence reason specification ^c
has facts: editor preferred term ^ap "failed exploratory term"@en; definition ^ap "The term was used in an attempt to structure part of the ontology but in retrospect failed to do a good job"@en; term editor ^ap "Person:Alan Ruttenberg"@en

metadata completeⁿⁱ back to ToC or Named Individual ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000120

Class has all its metadata, but is either not guaranteed to be in its final location in the asserted IS_A hierarchy or refers to another class that is not complete.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

belongs to: curation status specification ^c
has facts: editor preferred term ^ap "metadata complete"@en; definition ^ap "Class has all its metadata, but is either not guaranteed to be in its final location in the asserted IS_A hierarchy or refers to another class that is not complete."@en

metadata incompleteⁿⁱ back to ToC or Named Individual ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000123

Class is being worked on; however, the metadata (including definition) are not complete or sufficiently clear to the branch editors.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

belongs to: curation status specification ^c
has facts: editor preferred term ^ap "metadata incomplete"@en; definition ^ap "Class is being worked on; however, the metadata (including definition) are not complete or sufficiently clear to the branch editors."@en

named class expressionⁿⁱ back to ToC or Named Individual ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000421

A named class expression is a logical expression that is given a name. The name can be used in place of the expression.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

belongs to: denotator type ^c
has facts: editor preferred term ^ap "named class expression"@en; definition ^ap "A named class expression is a logical expression that is given a name. The name can be used in place of the expression."@en; editor note ^ap "named class expressions are used in order to have more concise logical definition but their extensions may not be interesting classes on their own. In languages such as OWL, with no provisions for macros, these show up as actuall classes. Tools may with to not show them as such, and to replace uses of the macros with their expansions"@en; term editor ^ap "Alan Ruttenberg"@en

organizational termⁿⁱ back to ToC or Named Individual ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000121

Term created to ease viewing/sort terms for development purpose, and will not be included in a release

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

belongs to: curation status specification ^c
has facts: editor preferred term ^ap "organizational term"@en; definition ^ap "Term created to ease viewing/sort terms for development purpose, and will not be included in a release"@en

out of scopeⁿⁱ back to ToC or Named Individual ToC

IRI: http://purl.obolibrary.org/obo/OMO_0001000

The term was added to the ontology on the assumption it was in scope, but it turned out later that it was not.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

belongs to: obsolescence reason specification ^c
has facts: definition ^ap "The term was added to the ontology on the assumption it was in scope, but it turned out later that it was not."@en; editor note ^ap "This obsolesence reason should be used conservatively. Typical valid examples are: un-necessary grouping classes in disease ontologies, a phenotype term added on the assumption it was a disease."@en; term editor ^ap 0000 0001 5208 3432 ^ep; I A O 0000233 ^ap "https://github.com/information-artifact-ontology/ontology-metadata/issues/77"; I A O 0000234 ^ap "https://orcid.org/0000-0001-5208-3432"

pending final vettingⁿⁱ back to ToC or Named Individual ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000125

All definitions, placement in the asserted IS_A hierarchy and required minimal metadata are complete. The class is awaiting a final review by someone other than the term editor.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

belongs to: curation status specification ^c
has facts: editor preferred term ^ap "pending final vetting"@en; definition ^ap "All definitions, placement in the asserted IS_A hierarchy and required minimal metadata are complete. The class is awaiting a final review by someone other than the term editor."@en

placeholder removedⁿⁱ back to ToC or Named Individual ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000226

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

belongs to: obsolescence reason specification ^c
has facts: editor preferred term ^ap "placeholder removed"@en

ready for releaseⁿⁱ back to ToC or Named Individual ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000122

Class has undergone final review, is ready for use, and will be included in the next release. Any class lacking "ready_for_release" should be considered likely to change place in hierarchy, have its definition refined, or be obsoleted in the next release. Those classes deemed "ready_for_release" will also derived from a chain of ancestor classes that are also "ready_for_release."

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

belongs to: curation status specification ^c
has facts: editor preferred term ^ap "ready for release"@en; definition ^ap "Class has undergone final review, is ready for use, and will be included in the next release. Any class lacking "ready_for_release" should be considered likely to change place in hierarchy, have its definition refined, or be obsoleted in the next release. Those classes deemed "ready_for_release" will also derived from a chain of ancestor classes that are also "ready_for_release.""@en

requires discussionⁿⁱ back to ToC or Named Individual ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000428

A term that is metadata complete, has been reviewed, and problems have been identified that require discussion before release. Such a term requires editor note(s) to identify the outstanding issues.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Source: group:OBI

belongs to: curation status specification ^c
has facts: editor preferred term ^ap "requires discussion"@en; definition ^ap "A term that is metadata complete, has been reviewed, and problems have been identified that require discussion before release. Such a term requires editor note(s) to identify the outstanding issues."@en; term editor ^ap "Alan Ruttenberg"@en; definition source ^ap "group:OBI"@en

term importedⁿⁱ back to ToC or Named Individual ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000228

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

belongs to: obsolescence reason specification ^c
has facts: editor preferred term ^ap "term imported"@en; editor note ^ap "This is to be used when the original term has been replaced by a term imported from an other ontology. An editor note should indicate what is the URI of the new term to use."@en

term splitⁿⁱ back to ToC or Named Individual ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000229

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

belongs to: obsolescence reason specification ^c
has facts: editor preferred term ^ap "term split"@en; editor note ^ap "This is to be used when a term has been split in two or more new terms. An editor note should indicate the reason for the split and indicate the URIs of the new terms created."@en

terms mergedⁿⁱ back to ToC or Named Individual ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000227

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

belongs to: obsolescence reason specification ^c
has facts: editor preferred term ^ap "terms merged"@en; editor note ^ap "An editor note should explain what were the merged terms and the reason for the merge."@en

to be replaced with external ontology termⁿⁱ back to ToC or Named Individual ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000423

Terms with this status should eventually replaced with a term from another ontology.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Source: group:OBI

belongs to: curation status specification ^c
has facts: editor preferred term ^ap "to be replaced with external ontology term"@en; definition ^ap "Terms with this status should eventually replaced with a term from another ontology."@en; term editor ^ap "Alan Ruttenberg"@en; definition source ^ap "group:OBI"@en

uncuratedⁿⁱ back to ToC or Named Individual ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000124

Nothing done yet beyond assigning a unique class ID and proposing a preferred term.

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

belongs to: curation status specification ^c
has facts: editor preferred term ^ap "uncurated"@en; definition ^ap "Nothing done yet beyond assigning a unique class ID and proposing a preferred term."@en

universalⁿⁱ back to ToC or Named Individual ToC

IRI: http://purl.obolibrary.org/obo/IAO_0000410

Is defined by: https://nfdi.fiz-karlsruhe.de/ontology

Source: A Formal Theory of Substances, Qualities, and Universals, http://ontology.buffalo.edu/bfo/SQU.pdf

belongs to: denotator type ^c
has facts: editor preferred term ^ap "universal"@en; editor note ^ap "Hard to give a definition for. Intuitively a "natural kind" rather than a collection of any old things, which a class is able to be, formally. At the meta level, universals are defined as positives, are disjoint with their siblings, have single asserted parents."@en; term editor ^ap "Alan Ruttenberg"@en; definition source ^ap "A Formal Theory of Substances, Qualities, and Universals, http://ontology.buffalo.edu/bfo/SQU.pdf"@en

SWRL rules

Rule #6
Rule #7
Rule #8
Rule #9
Contact Point of Project
Contact Point of Resource
Contributor
Funding Organization
Publisher

Rule #6back to ToC or SWRL ToC

disposition ^c(?d) , has characteristic ^op(?e,?d) -> has disposition ^op(?e,?d)

Rule #7back to ToC or SWRL ToC

quality ^c(?d) , has characteristic ^op(?e,?d) -> has quality ^op(?e,?d)

Rule #8back to ToC or SWRL ToC

role ^c(?d) , has characteristic ^op(?e,?d) -> has role ^op(?e,?d)

Rule #9back to ToC or SWRL ToC

function ^c(?d) , has characteristic ^op(?e,?d) -> has function ^op(?e,?d)

Contact Point of Projectback to ToC or SWRL ToC

agent ^c(?) , project ^c(?) , contact point role ^c(?) , has role ^op(?,?) , participates in ^op(?,?) , realized in ^op(?,?) -> contact point of ^op(?,?)

Contact Point of Resourceback to ToC or SWRL ToC

agent ^c(?) , resource ^c(?) , contacting ^c(?) , contact point role ^c(?) , has role ^op(?,?) , participates in ^op(?,?) , participates in ^op(?,?) , realized in ^op(?,?) -> contact point of ^op(?,?)

Contributorback to ToC or SWRL ToC

agent ^c(?) , resource ^c(?) , contributing ^c(?) , contributor role ^c(?) , participates in ^op(?,?) , participates in ^op(?,?) , has role ^op(?,?) , realized in ^op(?,?) -> contributor of ^op(?,?)

Funding Organizationback to ToC or SWRL ToC

organization ^c(?) , project ^c(?) , funding organization role ^c(?) , has role ^op(?,?) , realized in ^op(?,?) , participates in ^op(?,?) -> has funding organization ^op(?,?)

Publisherback to ToC or SWRL ToC

agent ^c(?) , resource ^c(?) , publishing process ^c(?) , publisher role ^c(?) , participates in ^op(?,?) , participates in ^op(?,?) , has role ^op(?,?) , realized in ^op(?,?) -> publisher of ^op(?,?)

Legend back to ToC

^c: Classes
^op: Object Properties
^dp: Data Properties
ⁿⁱ: Named Individuals
^ep: External Properties

Changes from last version

Classes

Modified classes

http://purl.obolibrary.org/obo/BFO_0000003
- Added: "b is an occurrent entity iff b is an entity that has temporal parts. (axiom label in BFO2 Reference: [079-001])"@en
- Added: "Every occurrent occupies_spatiotemporal_region some spatiotemporal region. (axiom label in BFO2 Reference: [108-001])"@en
- Added: "(forall (x) (iff (Occurrent x) (and (Entity x) (exists (y) (temporalPartOf y x))))) // axiom label in BFO2 CLIF: [079-001] "^^xsd:string
- Added: "BFO 2 Reference: s-dependence obtains between every process and its participants in the sense that, as a matter of necessity, this process could not have existed unless these or those participants existed also. A process may have a succession of participants at different phases of its unfolding. Thus there may be different players on the field at different times during the course of a football game; but the process which is the entire game s-depends_on all of these players nonetheless. Some temporal parts of this process will s-depend_on on only some of the players."@en
- Added: rdfs:label "occurrent"@en
- Added: "(forall (x) (if (Occurrent x) (exists (r) (and (SpatioTemporalRegion r) (occupiesSpatioTemporalRegion x r))))) // axiom label in BFO2 CLIF: [108-001] "^^xsd:string
- Added: "Simons uses different terminology for relations of occurrents to regions: Denote the spatio-temporal location of a given occurrent e by 'spn[e]' and call this region its span. We may say an occurrent is at its span, in any larger region, and covers any smaller region. Now suppose we have fixed a frame of reference so that we can speak not merely of spatio-temporal but also of spatial regions (places) and temporal regions (times). The spread of an occurrent, (relative to a frame of reference) is the space it exactly occupies, and its spell is likewise the time it exactly occupies. We write 'spr[e]' and `spl[e]' respectively for the spread and spell of e, omitting mention of the frame."^^xsd:string
- Added: DisjointClasses DisjointClasses(<http://purl.obolibrary.org/obo/BFO_0000002> <http://purl.obolibrary.org/obo/BFO_0000003>)
- Added: "Occurrent doesn't have a closure axiom because the subclasses don't necessarily exhaust all possibilites. An example would be the sum of a process and the process boundary of another process."@en
- Added: "An entity that has temporal parts and that happens, unfolds or develops through time."@en
- Added: rdfs:isDefinedBy http://purl.obolibrary.org/obo/bfo.owl
- Added: SubClass of http://purl.obolibrary.org/obo/BFO_0000001
- Added: "occurrent"^^xsd:string
- Added: "Occurrent"^^xsd:string
- Added: DisjointClasses DisjointClasses(<http://purl.obolibrary.org/obo/BFO_0000003> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000050> <http://purl.obolibrary.org/obo/BFO_0000002>))
- Added: "BFO 2 Reference: every occurrent that is not a temporal or spatiotemporal region is s-dependent on some independent continuant that is not a spatial region"@en
- Added: "An occurrent is an entity that unfolds itself in time or it is the instantaneous boundary of such an entity (for example a beginning or an ending) or it is a temporal or spatiotemporal region which such an entity occupies_temporal_region or occupies_spatiotemporal_region. (axiom label in BFO2 Reference: [077-002])"@en
http://purl.obolibrary.org/obo/BFO_0000004
- Added: "a chair"@en
- Added: "a leg"@en
- Added: "a spatial region"@en
- Added: "IndependentContinuant"^^xsd:string
- Added: rdfs:label "independent continuant"@en
- Added: "a molecule"@en
- Added: "an organism"@en
- Added: DisjointClasses DisjointClasses(<http://purl.obolibrary.org/obo/BFO_0000004> <http://purl.obolibrary.org/obo/BFO_0000020>)
- Added: DisjointClasses DisjointClasses(<http://purl.obolibrary.org/obo/BFO_0000004> <http://purl.obolibrary.org/obo/BFO_0000031>)
- Added: "(forall (x t) (if (IndependentContinuant x) (exists (r) (and (SpatialRegion r) (locatedInAt x r t))))) // axiom label in BFO2 CLIF: [134-001] "^^xsd:string
- Added: "ic"^^xsd:string
- Added: "an atom"@en
- Added: "the bottom right portion of a human torso"@en
- Added: "b is an independent continuant = Def. b is a continuant which is such that there is no c and no t such that b s-depends_on c at t. (axiom label in BFO2 Reference: [017-002])"@en
- Added: SubClass of http://purl.obolibrary.org/obo/BFO_0000002
- Added: rdfs:isDefinedBy http://purl.obolibrary.org/obo/bfo.owl
- Added: "(forall (x t) (if (and (IndependentContinuant x) (existsAt x t)) (exists (y) (and (Entity y) (specificallyDependsOnAt y x t))))) // axiom label in BFO2 CLIF: [018-002] "^^xsd:string
- Added: "For any independent continuant b and any time t there is some spatial region r such that b is located_in r at t. (axiom label in BFO2 Reference: [134-001])"@en
- Added: "a heart"@en
- Added: "the interior of your mouth"@en
- Added: "(iff (IndependentContinuant a) (and (Continuant a) (not (exists (b t) (specificallyDependsOnAt a b t))))) // axiom label in BFO2 CLIF: [017-002] "^^xsd:string
- Added: "an orchestra."@en
- Added: "For every independent continuant b and time t during the region of time spanned by its life, there are entities which s-depends_on b during t. (axiom label in BFO2 Reference: [018-002])"@en
http://purl.obolibrary.org/obo/BFO_0000019
- Added: "the length of the circumference of your waist"@en
- Added: "a quality is a specifically dependent continuant that, in contrast to roles and dispositions, does not require any further process in order to be realized. (axiom label in BFO2 Reference: [055-001])"@en
- Added: "Quality"^^xsd:string
- Added: SubClass of http://purl.obolibrary.org/obo/BFO_0000020
- Added: "(forall (x) (if (Quality x) (SpecificallyDependentContinuant x))) // axiom label in BFO2 CLIF: [055-001] "^^xsd:string
- Added: rdfs:label "quality"@en
- Added: "the color of a tomato"@en
- Added: rdfs:isDefinedBy http://purl.obolibrary.org/obo/bfo.owl
- Added: "the shape of your nose"@en
- Added: DisjointClasses DisjointClasses(<http://purl.obolibrary.org/obo/BFO_0000017> <http://purl.obolibrary.org/obo/BFO_0000019>)
- Added: "the shape of your nostril"@en
- Added: "If an entity is a quality at any time that it exists, then it is a quality at every time that it exists. (axiom label in BFO2 Reference: [105-001])"@en
- Added: "(forall (x) (if (exists (t) (and (existsAt x t) (Quality x))) (forall (t_1) (if (existsAt x t_1) (Quality x))))) // axiom label in BFO2 CLIF: [105-001] "^^xsd:string
- Added: "the ambient temperature of this portion of air"@en
- Added: "the mass of this piece of gold."@en
- Added: "quality"^^xsd:string
http://purl.obolibrary.org/obo/BFO_0000023
- Added: "Role"^^xsd:string
- Added: "the role of a building in serving as a military target"@en
- Added: "BFO 2 Reference: One major family of examples of non-rigid universals involves roles, and ontologies developed for corresponding administrative purposes may consist entirely of representatives of entities of this sort. Thus ‘professor’, defined as follows,b instance_of professor at t =Def. there is some c, c instance_of professor role & c inheres_in b at t.denotes a non-rigid universal and so also do ‘nurse’, ‘student’, ‘colonel’, ‘taxpayer’, and so forth. (These terms are all, in the jargon of philosophy, phase sortals.) By using role terms in definitions, we can create a BFO conformant treatment of such entities drawing on the fact that, while an instance of professor may be simultaneously an instance of trade union member, no instance of the type professor role is also (at any time) an instance of the type trade union member role (any more than any instance of the type color is at any time an instance of the type length).If an ontology of employment positions should be defined in terms of roles following the above pattern, this enables the ontology to do justice to the fact that individuals instantiate the corresponding universals – professor, sergeant, nurse – only during certain phases in their lives."@en
- Added: "(forall (x) (if (Role x) (RealizableEntity x))) // axiom label in BFO2 CLIF: [061-001] "^^xsd:string
- Added: "the priest role"@en
- Added: "the role of a boundary to demarcate two neighboring administrative territories"@en
- Added: rdfs:label "role"@en
- Added: "John’s role of husband to Mary is dependent on Mary’s role of wife to John, and both are dependent on the object aggregate comprising John and Mary as member parts joined together through the relational quality of being married."@en
- Added: "the role of a stone in marking a property boundary"@en
- Added: rdfs:isDefinedBy http://purl.obolibrary.org/obo/bfo.owl
- Added: "the role of subject in a clinical trial"@en
- Added: DisjointClasses DisjointClasses(<http://purl.obolibrary.org/obo/BFO_0000016> <http://purl.obolibrary.org/obo/BFO_0000023>)
- Added: SubClass of http://purl.obolibrary.org/obo/BFO_0000017
- Added: "b is a role means: b is a realizable entity & b exists because there is some single bearer that is in some special physical, social, or institutional set of circumstances in which this bearer does not have to be& b is not such that, if it ceases to exist, then the physical make-up of the bearer is thereby changed. (axiom label in BFO2 Reference: [061-001])"@en
- Added: "role"^^xsd:string
- Added: "A realizable entity the manifestation of which brings about some result or end that is not essential to a continuant in virtue of the kind of thing that it is but that can be served or participated in by that kind of continuant in some kinds of natural, social or institutional contexts."@en
- Added: "the student role"@en
http://purl.obolibrary.org/obo/BFO_0000029
- Added: "the interior of your office"@en
- Added: "Manhattan Canyon)"@en
- Added: "Site"^^xsd:string
- Added: "the interior of your refrigerator"@en
- Added: "the interior of your bedroom"@en
- Added: "the lumen of your gut"@en
- Added: "b is a site means: b is a three-dimensional immaterial entity that is (partially or wholly) bounded by a material entity or it is a three-dimensional immaterial part thereof. (axiom label in BFO2 Reference: [034-002])"@en
- Added: "the interior of a kangaroo pouch"@en
- Added: "the Grand Canyon"@en
- Added: "your left nostril (a fiat part – the opening – of your left nasal cavity)"@en
- Added: rdfs:label "site"@en
- Added: SubClass of http://purl.obolibrary.org/obo/BFO_0000141
- Added: "a hole in the interior of a portion of cheese"@en
- Added: DisjointClasses DisjointClasses(<http://purl.obolibrary.org/obo/BFO_0000006> <http://purl.obolibrary.org/obo/BFO_0000029>)
- Added: rdfs:isDefinedBy http://purl.obolibrary.org/obo/bfo.owl
- Added: "(forall (x) (if (Site x) (ImmaterialEntity x))) // axiom label in BFO2 CLIF: [034-002] "^^xsd:string
- Added: "a rabbit hole"@en
- Added: "an air traffic control region defined in the airspace above an airport"@en
- Added: "the hold of a ship"@en
- Added: "the Piazza San Marco"@en
- Added: "the interior of the trunk of your car"@en
- Added: "site"^^xsd:string
- Added: "the cockpit of an aircraft"@en
http://purl.obolibrary.org/obo/BFO_0000040
- Added: "An independent continuant that is spatially extended whose identity is independent of that of other entities and can be maintained through time."@en
- Added: "BFO 2 Reference: ‘Matter’ is intended to encompass both mass and energy (we will address the ontological treatment of portions of energy in a later version of BFO). A portion of matter is anything that includes elementary particles among its proper or improper parts: quarks and leptons, including electrons, as the smallest particles thus far discovered; baryons (including protons and neutrons) at a higher level of granularity; atoms and molecules at still higher levels, forming the cells, organs, organisms and other material entities studied by biologists, the portions of rock studied by geologists, the fossils studied by paleontologists, and so on.Material entities are three-dimensional entities (entities extended in three spatial dimensions), as contrasted with the processes in which they participate, which are four-dimensional entities (entities extended also along the dimension of time).According to the FMA, material entities may have immaterial entities as parts – including the entities identified below as sites; for example the interior (or ‘lumen’) of your small intestine is a part of your body. BFO 2.0 embodies a decision to follow the FMA here."@en
- Added: "a puff of smoke"@en
- Added: "a flame"@en
- Added: "Every entity which has a material entity as continuant part is a material entity. (axiom label in BFO2 Reference: [020-002])"@en
- Added: "a forest fire"@en
- Added: "BFO 2 Reference: Material entities (continuants) can preserve their identity even while gaining and losing material parts. Continuants are contrasted with occurrents, which unfold themselves in successive temporal parts or phases [60"@en
- Added: "MaterialEntity"^^xsd:string
- Added: DisjointClasses DisjointClasses(<http://purl.obolibrary.org/obo/BFO_0000040> <http://purl.obolibrary.org/obo/BFO_0000141>)
- Added: "(forall (x) (if (and (Entity x) (exists (y t) (and (MaterialEntity y) (continuantPartOfAt y x t)))) (MaterialEntity x))) // axiom label in BFO2 CLIF: [020-002] "^^xsd:string
- Added: "a hurricane"@en
- Added: "(forall (x) (if (and (Entity x) (exists (y t) (and (MaterialEntity y) (continuantPartOfAt x y t)))) (MaterialEntity x))) // axiom label in BFO2 CLIF: [021-002] "^^xsd:string
- Added: "a human being"@en
- Added: rdfs:isDefinedBy http://purl.obolibrary.org/obo/bfo.owl
- Added: "every entity of which a material entity is continuant part is also a material entity. (axiom label in BFO2 Reference: [021-002])"@en
- Added: SubClass of http://purl.obolibrary.org/obo/BFO_0000004
- Added: "an energy wave"@en
- Added: "a sea wave"@en
- Added: "a photon"@en
- Added: "an epidemic"@en
- Added: "an aggregate of human beings."@en
- Added: "material"^^xsd:string
- Added: "BFO 2 Reference: Object, Fiat Object Part and Object Aggregate are not intended to be exhaustive of Material Entity. Users are invited to propose new subcategories of Material Entity."@en
- Added: "(forall (x) (if (MaterialEntity x) (IndependentContinuant x))) // axiom label in BFO2 CLIF: [019-002] "^^xsd:string
- Added: "A material entity is an independent continuant that has some portion of matter as proper or improper continuant part. (axiom label in BFO2 Reference: [019-002])"@en
- Added: "a tornado"@en
- Added: rdfs:label "material entity"@en
- Added: "the undetached arm of a human being"@en
http://purl.obolibrary.org/obo/IAO_0000010
- Added: "PERSON: Melanie Courtot"@en
- Added: "PERSON: Bjoern Peters"@en
- Added: "software"@en
- Added: "PERSON: Chris Stoeckert"@en
- Added: "see sourceforge tracker discussion at http://sourceforge.net/tracker/index.php?func=detail&aid=1958818&group_id=177891&atid=886178"@en
- Added: SubClass of https://nfdi.fiz-karlsruhe.de/ontology/CreativeWork
- Added: "GROUP: OBI"@en
- Added: http://purl.obolibrary.org/obo/IAO_0000120
- Added: SubClass of http://purl.obolibrary.org/obo/IAO_0000104
- Added: rdfs:label "software"@en
- Added: "PERSON: Alan Ruttenberg"@en
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Added: "Software is a plan specification composed of a series of instructions that can be interpreted by or directly executed by a processing unit."@en
http://purl.obolibrary.org/obo/IAO_0000025
- Added: "OBI_0000058"@en
- Added: http://purl.obolibrary.org/obo/IAO_0000120
- Added: "person:Chris Stoeckert"@en
- Added: "R, Perl, Java"@en
- Added: "A language in which source code is written that is intended to be executed/run by a software interpreter. Programming languages are ways to write instructions that specify what to do, and sometimes, how to do it."@en
- Added: "group:OBI"@en
- Added: "programming language"@en
- Added: rdfs:label "programming language"@en
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Added: "person:Alan Ruttenberg"@en
- Added: SubClass of https://nfdi.fiz-karlsruhe.de/ontology/TechnologicalMeans
http://purl.obolibrary.org/obo/IAO_0000030
- Added: "A generically dependent continuant that is about some thing."@en
- Added: "information_content_entity 'is_encoded_in' some digital_entity in obi before split (040907). information_content_entity 'is_encoded_in' some physical_document in obi before split (040907). Previous. An information content entity is a non-realizable information entity that 'is encoded in' some digital or physical entity."@en
- Added: "IAO"^^xsd:string
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Added: "Examples of information content entites include journal articles, data, graphical layouts, and graphs."@en
- Added: http://purl.obolibrary.org/obo/IAO_0000122
- Added: SubClass of http://purl.obolibrary.org/obo/BFO_0000031
- Added: "An information content entity is an entity that is generically dependent on some artifact and stands in relation of aboutness to some entity."^^xsd:string
- Added: rdfs:label "information content entity"^^xsd:string
- Added: "OBI_0000142"@en
- Added: "PERSON: Chris Stoeckert"@en
- Added: "2014-03-10: The use of \"thing\" is intended to be general enough to include universals and configurations (see https://groups.google.com/d/msg/information-ontology/GBxvYZCk1oc/-L6B5fSBBTQJ)."@en
- Added: "Examples of information content entites include journal articles, data, graphical layouts, and graphs."^^xsd:string
- Added: rdfs:label "information content entity"@en
- Added: "information content entity"@en
http://purl.obolibrary.org/obo/IAO_0000033
- Added: SubClass of http://purl.obolibrary.org/obo/IAO_0000030
- Added: http://purl.obolibrary.org/obo/IAO_0000122
- Added: "Werner pushed back on calling it realizable information entity as it isn't realizable. However this name isn't right either. An example would be a recipe. The realizable entity would be a plan, but the information entity isn't about the plan, it, once concretized, *is* the plan. -Alan"@en
- Added: "PERSON: Alan Ruttenberg"@en
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Added: "2013-05-30 Alan Ruttenberg: What differentiates a directive information entity from an information concretization is that it can have concretizations that are either qualities or realizable entities. The concretizations that are realizable entities are created when an individual chooses to take up the direction, i.e. has the intention to (try to) realize it."@en
- Added: "An information content entity whose concretizations indicate to their bearer how to realize them in a process."@en
- Added: "PERSON: Bjoern Peters"@en
- Added: "8/6/2009 Alan Ruttenberg: Changed label from \"information entity about a realizable\" after discussions at ICBO"@en
- Added: rdfs:label "directive information entity"@en
- Added: "2009-03-16: provenance: a term realizable information entity was proposed for OBI (OBI_0000337) , edited by the PlanAndPlannedProcess branch. Original definition was \"is the specification of a process that can be concretized and realized by an actor\" with alternative term \"instruction\".It has been subsequently moved to IAO where the objective for which the original term was defined was satisfied with the definitionof this, different, term."@en
http://purl.obolibrary.org/obo/IAO_0000104
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Added: "PMID: 18323827.Nat Med. 2008 Mar;14(3):226.New plan proposed to help resolve conflicting medical advice."@en
- Added: "2014-03-31: A plan specification can have other parts, such as conditional specifications."@en
- Added: "A directive information entity with action specifications and objective specifications as parts, and that may be concretized as a realizable entity that, if realized, is realized in a process in which the bearer tries to achieve the objectives by taking the actions specified."@en
- Added: rdfs:comment "2/3/2009 Comment from OBI review. Action specification not well enough specified. Conditional specification not well enough specified. Question whether all plan specifications have objective specifications. Request that IAO either clarify these or change definitions not to use them"@en
- Added: "plan specification"@en
- Added: "Alan Ruttenberg"@en
- Added: http://purl.obolibrary.org/obo/IAO_0000122
- Added: rdfs:label "plan specification"@en
- Added: "Clint Dowland"@en
- Added: SubClass of http://purl.obolibrary.org/obo/IAO_0000033
- Added: "2009-03-16: provenance: a term a plan was proposed for OBI (OBI_0000344) , edited by the PlanAndPlannedProcess branch. Original definition was \" a plan is a specification of a process that is realized by an actor to achieve the objective specified as part of the plan\". It has been subsequently moved to IAO where the objective for which the original term was defined was satisfied with the definitionof this, different, term."@en
- Added: rdfs:seeAlso "https://github.com/information-artifact-ontology/IAO/issues/231#issuecomment-1010455131"@en
- Added: "OBI_0000344"@en
- Added: "Alternative previous definition: a plan is a set of instructions that specify how an objective should be achieved"@en
- Added: "2022-01-16 Updated definition to that proposed by Clint Dowloand, IAO Issue 231."@en
- Added: "OBI Plan and Planned Process branch"@en
http://purl.obolibrary.org/obo/IAO_0000311
- Added: SubClass of https://nfdi.fiz-karlsruhe.de/ontology/CreativeWork
- Added: https://github.com/information-artifact-ontology/IAO/issues/232
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Added: rdfs:comment "Revisit the term in Octorber 2020. Improve the defintion."@en
- Added: "PERSON: Lawrence Hunter"@en
- Added: "A document that is the output of a publishing process."@en
- Added: "publication"@en
- Added: rdfs:label "publication"@en
- Added: EquivalentClasses EquivalentClasses(<http://purl.obolibrary.org/obo/IAO_0000311> ObjectIntersectionOf(<http://purl.obolibrary.org/obo/IAO_0000310> ObjectAllValuesFrom(<http://purl.obolibrary.org/obo/OBI_0000312> <http://purl.obolibrary.org/obo/IAO_0000444>)))
- Added: "published document"@en
- Added: "journal article, newspaper story, book, etc."@en
- Added: SubClass of http://purl.obolibrary.org/obo/IAO_0000310
- Added: http://purl.obolibrary.org/obo/IAO_0000120
- Added: "PERSON: Chris Stoeckert"@en
- Added: "PERSON: Jie Zheng"@en
http://purl.obolibrary.org/obo/IAO_0000444
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Added: "VEuPathDB"@en
- Added: SubClass of http://purl.obolibrary.org/obo/OBI_0000011
- Added: "https://en.wikipedia.org/wiki/Publishing"^^xsd:string
- Added: https://github.com/information-artifact-ontology/IAO/issues/232
- Added: http://purl.obolibrary.org/obo/IAO_0000120
- Added: "Person: Jie Zheng"@en
- Added: rdfs:label "publishing process"@en
- Added: "A planned process of making information, such as literature, music, and software etc., available to the public for sale or for free."@en
http://purl.obolibrary.org/obo/OBI_0000011
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Added: rdfs:label "planned process"@en
- Added: "planned process"@en
- Added: SubClass of http://purl.obolibrary.org/obo/BFO_0000015
- Added: "A process that realizes a plan which is the concretization of a plan specification."@en
- Added: http://purl.obolibrary.org/obo/obi.owl
http://www.ebi.ac.uk/swo/SWO_0000002
- Added: "A licence is a legal instrument (usually by way of contract law, with or without printed material) governing the use or redistribution of the resource containing the licence."^^xsd:string
- Added: SubClass of http://purl.obolibrary.org/obo/IAO_0000030
- Added: rdfs:label "software license"^^xsd:string
- Added: rdfs:label "licence"@en
- Added: "James Malone"^^xsd:string
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Added: "Modified from http://en.wikipedia.org/wiki/Software_license"^^xsd:string
https://nfdi.fiz-karlsruhe.de/ontology/AcademicDiscipline
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
https://nfdi.fiz-karlsruhe.de/ontology/Agent
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
https://nfdi.fiz-karlsruhe.de/ontology/City
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
https://nfdi.fiz-karlsruhe.de/ontology/Collection
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
https://nfdi.fiz-karlsruhe.de/ontology/Consortium
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
- Deleted: SubClass of https://nfdi.fiz-karlsruhe.de/ontology/Organization
https://nfdi.fiz-karlsruhe.de/ontology/ConsortiumMember
- Added: SubClass of https://nfdi.fiz-karlsruhe.de/ontology/Organization
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
https://nfdi.fiz-karlsruhe.de/ontology/ConsortiumMemberRole
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
https://nfdi.fiz-karlsruhe.de/ontology/ContactPointRole
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
https://nfdi.fiz-karlsruhe.de/ontology/Contacting
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
https://nfdi.fiz-karlsruhe.de/ontology/Contributing
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
https://nfdi.fiz-karlsruhe.de/ontology/ContributorRole
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
https://nfdi.fiz-karlsruhe.de/ontology/ControlledVocabulary
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
https://nfdi.fiz-karlsruhe.de/ontology/Country
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
https://nfdi.fiz-karlsruhe.de/ontology/CreativeWork
- Added: EquivalentClasses EquivalentClasses(<https://nfdi.fiz-karlsruhe.de/ontology/CreativeWork> ObjectIntersectionOf(<http://purl.obolibrary.org/obo/IAO_0000030> <https://schema.org/CreativeWork>))
- Added: SubClass of https://schema.org/CreativeWork
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: EquivalentClasses EquivalentClasses(<https://nfdi.fiz-karlsruhe.de/ontology/CreativeWork> ObjectIntersectionOf(<http://purl.obolibrary.org/obo/IAO_0000030> <http://schema.org/CreativeWork>))
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
https://nfdi.fiz-karlsruhe.de/ontology/DataPortal
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
https://nfdi.fiz-karlsruhe.de/ontology/Dataset
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
https://nfdi.fiz-karlsruhe.de/ontology/Event
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
https://nfdi.fiz-karlsruhe.de/ontology/FederalState
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
https://nfdi.fiz-karlsruhe.de/ontology/FundingOrganizationRole
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
https://nfdi.fiz-karlsruhe.de/ontology/Glossary
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
https://nfdi.fiz-karlsruhe.de/ontology/License
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
https://nfdi.fiz-karlsruhe.de/ontology/MIME-Type
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
https://nfdi.fiz-karlsruhe.de/ontology/MediaType
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
https://nfdi.fiz-karlsruhe.de/ontology/Ontology
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
https://nfdi.fiz-karlsruhe.de/ontology/Organization
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
https://nfdi.fiz-karlsruhe.de/ontology/Person
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
https://nfdi.fiz-karlsruhe.de/ontology/Place
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
- Deleted: EquivalentClasses EquivalentClasses(<http://purl.obolibrary.org/obo/GAZ_00000448> <https://nfdi.fiz-karlsruhe.de/ontology/Place>)
https://nfdi.fiz-karlsruhe.de/ontology/ProgrammingLanguage
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
https://nfdi.fiz-karlsruhe.de/ontology/Project
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
https://nfdi.fiz-karlsruhe.de/ontology/Publication
- Added: SubClass of http://purl.obolibrary.org/obo/IAO_0000310
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
https://nfdi.fiz-karlsruhe.de/ontology/PublisherRole
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
https://nfdi.fiz-karlsruhe.de/ontology/Resource
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
https://nfdi.fiz-karlsruhe.de/ontology/SemanticExpressivity
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
https://nfdi.fiz-karlsruhe.de/ontology/Service
- Added: EquivalentClasses EquivalentClasses(<https://nfdi.fiz-karlsruhe.de/ontology/Service> ObjectIntersectionOf(<http://purl.obolibrary.org/obo/IAO_0000030> <https://schema.org/Service>))
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Added: SubClass of https://schema.org/Service
- Deleted: EquivalentClasses EquivalentClasses(<https://nfdi.fiz-karlsruhe.de/ontology/Service> ObjectIntersectionOf(<http://purl.obolibrary.org/obo/IAO_0000030> <http://schema.org/Service>))
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
https://nfdi.fiz-karlsruhe.de/ontology/Software
- Added: SubClass of http://purl.obolibrary.org/obo/IAO_0000104
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
https://nfdi.fiz-karlsruhe.de/ontology/Specification
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
https://nfdi.fiz-karlsruhe.de/ontology/Standard
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
https://nfdi.fiz-karlsruhe.de/ontology/Taxonomy
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
https://nfdi.fiz-karlsruhe.de/ontology/TechnologicalMeans
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
https://nfdi.fiz-karlsruhe.de/ontology/Thesaurus
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
https://nfdi.fiz-karlsruhe.de/ontology/Website
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0

Added classes

http://purl.obolibrary.org/obo/APOLLO_SV_00000008
- Added: SubClass of http://purl.obolibrary.org/obo/OBI_0000011
- Added: EquivalentClasses EquivalentClasses(<http://purl.obolibrary.org/obo/APOLLO_SV_00000008> ObjectIntersectionOf(<http://purl.obolibrary.org/obo/OBI_0000011> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/OBI_0000299> ObjectUnionOf(<http://purl.obolibrary.org/obo/IAO_0000010> <http://purl.obolibrary.org/obo/IAO_0000096>))))
http://purl.obolibrary.org/obo/BFO_0000001
http://purl.obolibrary.org/obo/BFO_0000002
- Added: DisjointClasses DisjointClasses(<http://purl.obolibrary.org/obo/BFO_0000002> <http://purl.obolibrary.org/obo/BFO_0000003>)
- Added: SubClass of http://purl.obolibrary.org/obo/BFO_0000001
- Added: DisjointClasses DisjointClasses(<http://purl.obolibrary.org/obo/BFO_0000002> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000050> <http://purl.obolibrary.org/obo/BFO_0000003>))
http://purl.obolibrary.org/obo/BFO_0000006
- Added: DisjointClasses DisjointClasses(<http://purl.obolibrary.org/obo/BFO_0000006> <http://purl.obolibrary.org/obo/BFO_0000029>)
- Added: SubClass of http://purl.obolibrary.org/obo/BFO_0000141
http://purl.obolibrary.org/obo/BFO_0000015
- Added: SubClass of http://purl.obolibrary.org/obo/BFO_0000003
http://purl.obolibrary.org/obo/BFO_0000016
- Added: SubClass of http://purl.obolibrary.org/obo/BFO_0000017
- Added: DisjointClasses DisjointClasses(<http://purl.obolibrary.org/obo/BFO_0000016> <http://purl.obolibrary.org/obo/BFO_0000023>)
http://purl.obolibrary.org/obo/BFO_0000017
- Added: SubClass of http://purl.obolibrary.org/obo/BFO_0000020
- Added: DisjointClasses DisjointClasses(<http://purl.obolibrary.org/obo/BFO_0000017> <http://purl.obolibrary.org/obo/BFO_0000019>)
http://purl.obolibrary.org/obo/BFO_0000020
- Added: SubClass of http://purl.obolibrary.org/obo/BFO_0000002
- Added: DisjointClasses DisjointClasses(<http://purl.obolibrary.org/obo/BFO_0000020> <http://purl.obolibrary.org/obo/BFO_0000031>)
- Added: DisjointClasses DisjointClasses(<http://purl.obolibrary.org/obo/BFO_0000004> <http://purl.obolibrary.org/obo/BFO_0000020>)
http://purl.obolibrary.org/obo/BFO_0000031
- Added: SubClass of http://purl.obolibrary.org/obo/BFO_0000002
- Added: DisjointClasses DisjointClasses(<http://purl.obolibrary.org/obo/BFO_0000020> <http://purl.obolibrary.org/obo/BFO_0000031>)
- Added: DisjointClasses DisjointClasses(<http://purl.obolibrary.org/obo/BFO_0000004> <http://purl.obolibrary.org/obo/BFO_0000031>)
http://purl.obolibrary.org/obo/BFO_0000034
- Added: SubClass of http://purl.obolibrary.org/obo/BFO_0000016
http://purl.obolibrary.org/obo/BFO_0000141
- Added: DisjointClasses DisjointClasses(<http://purl.obolibrary.org/obo/BFO_0000040> <http://purl.obolibrary.org/obo/BFO_0000141>)
- Added: SubClass of http://purl.obolibrary.org/obo/BFO_0000004
http://purl.obolibrary.org/obo/IAO_0000005
- Added: SubClass of http://purl.obolibrary.org/obo/IAO_0000033
http://purl.obolibrary.org/obo/IAO_0000007
- Added: SubClass of http://purl.obolibrary.org/obo/IAO_0000033
http://purl.obolibrary.org/obo/IAO_0000027
- Added: SubClass of http://purl.obolibrary.org/obo/IAO_0000030
http://purl.obolibrary.org/obo/IAO_0000078
- Added: SubClass of http://purl.obolibrary.org/obo/IAO_0000102
- Added: EquivalentClasses EquivalentClasses(<http://purl.obolibrary.org/obo/IAO_0000078> ObjectOneOf(<http://purl.obolibrary.org/obo/IAO_0000002> <http://purl.obolibrary.org/obo/IAO_0000120> <http://purl.obolibrary.org/obo/IAO_0000121> <http://purl.obolibrary.org/obo/IAO_0000122> <http://purl.obolibrary.org/obo/IAO_0000123> <http://purl.obolibrary.org/obo/IAO_0000124> <http://purl.obolibrary.org/obo/IAO_0000125> <http://purl.obolibrary.org/obo/IAO_0000423> <http://purl.obolibrary.org/obo/IAO_0000428>))
http://purl.obolibrary.org/obo/IAO_0000096
- Added: SubClass of http://purl.obolibrary.org/obo/IAO_0000033
http://purl.obolibrary.org/obo/IAO_0000102
- Added: SubClass of http://purl.obolibrary.org/obo/IAO_0000027
http://purl.obolibrary.org/obo/IAO_0000225
- Added: EquivalentClasses EquivalentClasses(<http://purl.obolibrary.org/obo/IAO_0000225> ObjectOneOf(<http://purl.obolibrary.org/obo/IAO_0000103> <http://purl.obolibrary.org/obo/IAO_0000226> <http://purl.obolibrary.org/obo/IAO_0000227> <http://purl.obolibrary.org/obo/IAO_0000228> <http://purl.obolibrary.org/obo/IAO_0000229> <http://purl.obolibrary.org/obo/OMO_0001000>))
- Added: SubClass of http://purl.obolibrary.org/obo/IAO_0000102
http://purl.obolibrary.org/obo/IAO_0000310
- Added: SubClass of http://purl.obolibrary.org/obo/IAO_0000030
http://purl.obolibrary.org/obo/IAO_0000409
- Added: EquivalentClasses EquivalentClasses(<http://purl.obolibrary.org/obo/IAO_0000409> ObjectOneOf(<http://purl.obolibrary.org/obo/IAO_0000410> <http://purl.obolibrary.org/obo/IAO_0000420> <http://purl.obolibrary.org/obo/IAO_0000421>))
- Added: SubClass of http://purl.obolibrary.org/obo/IAO_0000102
https://nfdi.fiz-karlsruhe.de/ontology/DataCurationService
- Added: SubClass of https://nfdi.fiz-karlsruhe.de/ontology/Service
- Added: DisjointClasses DisjointClasses(<https://nfdi.fiz-karlsruhe.de/ontology/DataCurationService> <https://nfdi.fiz-karlsruhe.de/ontology/DatabasesService> <https://nfdi.fiz-karlsruhe.de/ontology/LibrariesAndAPIsService> <https://nfdi.fiz-karlsruhe.de/ontology/StorageService> <https://nfdi.fiz-karlsruhe.de/ontology/SupportAndConsultingService> <https://nfdi.fiz-karlsruhe.de/ontology/ToolsAndApplicationsService> <https://nfdi.fiz-karlsruhe.de/ontology/TrainingService> <https://nfdi.fiz-karlsruhe.de/ontology/WebApplicationsService> <https://nfdi.fiz-karlsruhe.de/ontology/WorkflowsAndPipelinesService>)
https://nfdi.fiz-karlsruhe.de/ontology/DatabasesService
- Added: SubClass of https://nfdi.fiz-karlsruhe.de/ontology/Service
- Added: DisjointClasses DisjointClasses(<https://nfdi.fiz-karlsruhe.de/ontology/DataCurationService> <https://nfdi.fiz-karlsruhe.de/ontology/DatabasesService> <https://nfdi.fiz-karlsruhe.de/ontology/LibrariesAndAPIsService> <https://nfdi.fiz-karlsruhe.de/ontology/StorageService> <https://nfdi.fiz-karlsruhe.de/ontology/SupportAndConsultingService> <https://nfdi.fiz-karlsruhe.de/ontology/ToolsAndApplicationsService> <https://nfdi.fiz-karlsruhe.de/ontology/TrainingService> <https://nfdi.fiz-karlsruhe.de/ontology/WebApplicationsService> <https://nfdi.fiz-karlsruhe.de/ontology/WorkflowsAndPipelinesService>)
https://nfdi.fiz-karlsruhe.de/ontology/LibrariesAndAPIsService
- Added: DisjointClasses DisjointClasses(<https://nfdi.fiz-karlsruhe.de/ontology/DataCurationService> <https://nfdi.fiz-karlsruhe.de/ontology/DatabasesService> <https://nfdi.fiz-karlsruhe.de/ontology/LibrariesAndAPIsService> <https://nfdi.fiz-karlsruhe.de/ontology/StorageService> <https://nfdi.fiz-karlsruhe.de/ontology/SupportAndConsultingService> <https://nfdi.fiz-karlsruhe.de/ontology/ToolsAndApplicationsService> <https://nfdi.fiz-karlsruhe.de/ontology/TrainingService> <https://nfdi.fiz-karlsruhe.de/ontology/WebApplicationsService> <https://nfdi.fiz-karlsruhe.de/ontology/WorkflowsAndPipelinesService>)
- Added: SubClass of https://nfdi.fiz-karlsruhe.de/ontology/Service
https://nfdi.fiz-karlsruhe.de/ontology/StorageService
- Added: DisjointClasses DisjointClasses(<https://nfdi.fiz-karlsruhe.de/ontology/DataCurationService> <https://nfdi.fiz-karlsruhe.de/ontology/DatabasesService> <https://nfdi.fiz-karlsruhe.de/ontology/LibrariesAndAPIsService> <https://nfdi.fiz-karlsruhe.de/ontology/StorageService> <https://nfdi.fiz-karlsruhe.de/ontology/SupportAndConsultingService> <https://nfdi.fiz-karlsruhe.de/ontology/ToolsAndApplicationsService> <https://nfdi.fiz-karlsruhe.de/ontology/TrainingService> <https://nfdi.fiz-karlsruhe.de/ontology/WebApplicationsService> <https://nfdi.fiz-karlsruhe.de/ontology/WorkflowsAndPipelinesService>)
- Added: SubClass of https://nfdi.fiz-karlsruhe.de/ontology/Service
https://nfdi.fiz-karlsruhe.de/ontology/SupportAndConsultingService
- Added: DisjointClasses DisjointClasses(<https://nfdi.fiz-karlsruhe.de/ontology/DataCurationService> <https://nfdi.fiz-karlsruhe.de/ontology/DatabasesService> <https://nfdi.fiz-karlsruhe.de/ontology/LibrariesAndAPIsService> <https://nfdi.fiz-karlsruhe.de/ontology/StorageService> <https://nfdi.fiz-karlsruhe.de/ontology/SupportAndConsultingService> <https://nfdi.fiz-karlsruhe.de/ontology/ToolsAndApplicationsService> <https://nfdi.fiz-karlsruhe.de/ontology/TrainingService> <https://nfdi.fiz-karlsruhe.de/ontology/WebApplicationsService> <https://nfdi.fiz-karlsruhe.de/ontology/WorkflowsAndPipelinesService>)
- Added: SubClass of https://nfdi.fiz-karlsruhe.de/ontology/Service
https://nfdi.fiz-karlsruhe.de/ontology/ToolsAndApplicationsService
- Added: DisjointClasses DisjointClasses(<https://nfdi.fiz-karlsruhe.de/ontology/DataCurationService> <https://nfdi.fiz-karlsruhe.de/ontology/DatabasesService> <https://nfdi.fiz-karlsruhe.de/ontology/LibrariesAndAPIsService> <https://nfdi.fiz-karlsruhe.de/ontology/StorageService> <https://nfdi.fiz-karlsruhe.de/ontology/SupportAndConsultingService> <https://nfdi.fiz-karlsruhe.de/ontology/ToolsAndApplicationsService> <https://nfdi.fiz-karlsruhe.de/ontology/TrainingService> <https://nfdi.fiz-karlsruhe.de/ontology/WebApplicationsService> <https://nfdi.fiz-karlsruhe.de/ontology/WorkflowsAndPipelinesService>)
- Added: SubClass of https://nfdi.fiz-karlsruhe.de/ontology/Service
https://nfdi.fiz-karlsruhe.de/ontology/TrainingService
- Added: SubClass of https://nfdi.fiz-karlsruhe.de/ontology/Service
- Added: DisjointClasses DisjointClasses(<https://nfdi.fiz-karlsruhe.de/ontology/DataCurationService> <https://nfdi.fiz-karlsruhe.de/ontology/DatabasesService> <https://nfdi.fiz-karlsruhe.de/ontology/LibrariesAndAPIsService> <https://nfdi.fiz-karlsruhe.de/ontology/StorageService> <https://nfdi.fiz-karlsruhe.de/ontology/SupportAndConsultingService> <https://nfdi.fiz-karlsruhe.de/ontology/ToolsAndApplicationsService> <https://nfdi.fiz-karlsruhe.de/ontology/TrainingService> <https://nfdi.fiz-karlsruhe.de/ontology/WebApplicationsService> <https://nfdi.fiz-karlsruhe.de/ontology/WorkflowsAndPipelinesService>)
https://nfdi.fiz-karlsruhe.de/ontology/WebApplicationsService
- Added: DisjointClasses DisjointClasses(<https://nfdi.fiz-karlsruhe.de/ontology/DataCurationService> <https://nfdi.fiz-karlsruhe.de/ontology/DatabasesService> <https://nfdi.fiz-karlsruhe.de/ontology/LibrariesAndAPIsService> <https://nfdi.fiz-karlsruhe.de/ontology/StorageService> <https://nfdi.fiz-karlsruhe.de/ontology/SupportAndConsultingService> <https://nfdi.fiz-karlsruhe.de/ontology/ToolsAndApplicationsService> <https://nfdi.fiz-karlsruhe.de/ontology/TrainingService> <https://nfdi.fiz-karlsruhe.de/ontology/WebApplicationsService> <https://nfdi.fiz-karlsruhe.de/ontology/WorkflowsAndPipelinesService>)
- Added: SubClass of https://nfdi.fiz-karlsruhe.de/ontology/Service
https://nfdi.fiz-karlsruhe.de/ontology/WorkflowsAndPipelinesService
- Added: SubClass of https://nfdi.fiz-karlsruhe.de/ontology/Service
- Added: DisjointClasses DisjointClasses(<https://nfdi.fiz-karlsruhe.de/ontology/DataCurationService> <https://nfdi.fiz-karlsruhe.de/ontology/DatabasesService> <https://nfdi.fiz-karlsruhe.de/ontology/LibrariesAndAPIsService> <https://nfdi.fiz-karlsruhe.de/ontology/StorageService> <https://nfdi.fiz-karlsruhe.de/ontology/SupportAndConsultingService> <https://nfdi.fiz-karlsruhe.de/ontology/ToolsAndApplicationsService> <https://nfdi.fiz-karlsruhe.de/ontology/TrainingService> <https://nfdi.fiz-karlsruhe.de/ontology/WebApplicationsService> <https://nfdi.fiz-karlsruhe.de/ontology/WorkflowsAndPipelinesService>)
https://schema.org/CreativeWork
https://schema.org/Service

Deleted classes

http://purl.obolibrary.org/obo/GAZ_00000448
http://schema.org/CreativeWork
http://schema.org/Service
http://www.geneontology.org/formats/oboInOwl#ObsoleteClass
https://nfdi.fiz-karlsruhe.de/ontology/Consulting&Funding
https://nfdi.fiz-karlsruhe.de/ontology/Information&Documentation
https://nfdi.fiz-karlsruhe.de/ontology/Learning&Teaching
https://nfdi.fiz-karlsruhe.de/ontology/Linkage&Enrichment
https://nfdi.fiz-karlsruhe.de/ontology/Participation&Collaboration
https://nfdi.fiz-karlsruhe.de/ontology/Publication&Dissemination
https://nfdi.fiz-karlsruhe.de/ontology/Storage&Preservation

Object Properties

Modified object properties

http://purl.obolibrary.org/obo/BFO_0000050
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Added: "Occurrents are not subject to change and so parthood between occurrents holds for all the times that the part exists. Many continuants are subject to change, so parthood between continuants will only hold at certain times, but this is difficult to specify in OWL. See http://purl.obolibrary.org/obo/ro/docs/temporal-semantics/"@en
- Added: InverseObjectProperties InverseObjectProperties(<http://purl.obolibrary.org/obo/BFO_0000050> <http://purl.obolibrary.org/obo/BFO_0000051>)
- Added: "my brain is part of my body (continuant parthood, two material entities)"@en
- Added: http://purl.obolibrary.org/obo/RO_0001901
- Added: "a core relation that holds between a part and its whole"@en
- Added: EquivalentObjectProperties EquivalentObjectProperties(<http://purl.obolibrary.org/obo/BFO_0000050> <https://nfdi.fiz-karlsruhe.de/ontology/partOf>)
- Added: rdfs:seeAlso "http://www.obofoundry.org/ro/#OBO_REL:part_of"^^xsd:string
- Added: "this day is part of this year (occurrent parthood)"@en
- Added: "part_of"@en
- Added: "my stomach cavity is part of my stomach (continuant parthood, immaterial entity is part of material entity)"@en
- Added: "Everything is part of itself. Any part of any part of a thing is itself part of that thing. Two distinct things cannot be part of each other."@en
- Added: rdfs:label "part of"@en
- Added: TransitiveObjectProperty TransitiveObjectProperty(<http://purl.obolibrary.org/obo/BFO_0000050>)
- Added: "Parthood requires the part and the whole to have compatible classes: only an occurrent can be part of an occurrent; only a process can be part of a process; only a continuant can be part of a continuant; only an independent continuant can be part of an independent continuant; only an immaterial entity can be part of an immaterial entity; only a specifically dependent continuant can be part of a specifically dependent continuant; only a generically dependent continuant can be part of a generically dependent continuant. (This list is not exhaustive.) A continuant cannot be part of an occurrent: use 'participates in'. An occurrent cannot be part of a continuant: use 'has participant'. A material entity cannot be part of an immaterial entity: use 'has location'. A specifically dependent continuant cannot be part of an independent continuant: use 'inheres in'. An independent continuant cannot be part of a specifically dependent continuant: use 'bearer of'."@en
- Added: "is part of"@en
http://purl.obolibrary.org/obo/BFO_0000051
- Added: http://purl.obolibrary.org/obo/RO_0001901
- Added: "a core relation that holds between a whole and its part"@en
- Added: InverseObjectProperties InverseObjectProperties(<http://purl.obolibrary.org/obo/BFO_0000050> <http://purl.obolibrary.org/obo/BFO_0000051>)
- Added: "Everything has itself as a part. Any part of any part of a thing is itself part of that thing. Two distinct things cannot have each other as a part."@en
- Added: "my stomach has part my stomach cavity (continuant parthood, material entity has part immaterial entity)"@en
- Added: EquivalentObjectProperties EquivalentObjectProperties(<http://purl.obolibrary.org/obo/BFO_0000051> <https://nfdi.fiz-karlsruhe.de/ontology/part>)
- Added: rdfs:label "has part"@en
- Added: "has part"@en
- Added: "has_part"@en
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Added: "this year has part this day (occurrent parthood)"@en
- Added: "Occurrents are not subject to change and so parthood between occurrents holds for all the times that the part exists. Many continuants are subject to change, so parthood between continuants will only hold at certain times, but this is difficult to specify in OWL. See http://purl.obolibrary.org/obo/ro/docs/temporal-semantics/"@en
- Added: "Parthood requires the part and the whole to have compatible classes: only an occurrent have an occurrent as part; only a process can have a process as part; only a continuant can have a continuant as part; only an independent continuant can have an independent continuant as part; only a specifically dependent continuant can have a specifically dependent continuant as part; only a generically dependent continuant can have a generically dependent continuant as part. (This list is not exhaustive.) A continuant cannot have an occurrent as part: use 'participates in'. An occurrent cannot have a continuant as part: use 'has participant'. An immaterial entity cannot have a material entity as part: use 'location of'. An independent continuant cannot have a specifically dependent continuant as part: use 'bearer of'. A specifically dependent continuant cannot have an independent continuant as part: use 'inheres in'."@en
- Added: "my body has part my brain (continuant parthood, two material entities)"@en
- Added: TransitiveObjectProperty TransitiveObjectProperty(<http://purl.obolibrary.org/obo/BFO_0000051>)
http://purl.obolibrary.org/obo/BFO_0000054
- Added: "this fragility is realized in this shattering"@en
- Added: rdfs:isDefinedBy http://purl.obolibrary.org/obo/bfo.owl
- Added: InverseObjectProperties InverseObjectProperties(<http://purl.obolibrary.org/obo/BFO_0000054> <http://purl.obolibrary.org/obo/BFO_0000055>)
- Added: Range http://purl.obolibrary.org/obo/BFO_0000015
- Added: "this investigator role is realized in this investigation"@en
- Added: "realized_in"@en
- Added: "[copied from inverse property 'realizes'] to say that b realizes c at t is to assert that there is some material entity d & b is a process which has participant d at t & c is a disposition or role of which d is bearer_of at t& the type instantiated by b is correlated with the type instantiated by c. (axiom label in BFO2 Reference: [059-003])"@en
- Added: "realized in"@en
- Added: domain http://purl.obolibrary.org/obo/BFO_0000017
- Added: rdfs:label "realized in"@en
- Added: "is realized by"@en
- Added: "this disease is realized in this disease course"@en
- Added: rdfs:comment "Paraphrase of elucidation: a relation between a realizable entity and a process, where there is some material entity that is bearer of the realizable entity and participates in the process, and the realizable entity comes to be realized in the course of the process"^^xsd:string
http://purl.obolibrary.org/obo/BFO_0000055
- Added: rdfs:isDefinedBy http://purl.obolibrary.org/obo/iao.owl
- Added: "to say that b realizes c at t is to assert that there is some material entity d & b is a process which has participant d at t & c is a disposition or role of which d is bearer_of at t& the type instantiated by b is correlated with the type instantiated by c. (axiom label in BFO2 Reference: [059-003])"@en
- Added: rdfs:label "realizes"@en
- Added: domain http://purl.obolibrary.org/obo/BFO_0000015
- Added: InverseObjectProperties InverseObjectProperties(<http://purl.obolibrary.org/obo/BFO_0000054> <http://purl.obolibrary.org/obo/BFO_0000055>)
- Added: Range http://purl.obolibrary.org/obo/BFO_0000017
- Added: rdfs:comment "Paraphrase of elucidation: a relation between a process and a realizable entity, where there is some material entity that is bearer of the realizable entity and participates in the process, and the realizable entity comes to be realized in the course of the process"^^xsd:string
- Added: "this shattering realizes this fragility"@en
- Added: "realizes"@en
- Added: "this disease course realizes this disease"@en
- Added: "this investigation realizes this investigator role"@en
http://purl.obolibrary.org/obo/IAO_0000136
- Added: domain http://purl.obolibrary.org/obo/IAO_0000030
- Added: SubProperty of http://www.w3.org/2002/07/owl#topObjectProperty
- Added: "Smith, Ceusters, Ruttenberg, 2000 years of philosophy"@en
- Added: "Alan Ruttenberg"@en
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Added: "person:Alan Ruttenberg"@en
- Added: rdfs:label "is about"^^xsd:string
- Added: "A (currently) primitive relation that relates an information artifact to an entity."@en
- Added: "7/6/2009 Alan Ruttenberg. Following discussion with Jonathan Rees, and introduction of \"mentions\" relation. Weaken the is_about relationship to be primitive. We will try to build it back up by elaborating the various subproperties that are more precisely defined. Some currently missing phenomena that should be considered \"about\" are predications - \"The only person who knows the answer is sitting beside me\" , Allegory, Satire, and other literary forms that can be topical without explicitly mentioning the topic."@en
- Added: "This document is about information artifacts and their representations"@en
- Added: "'is about' relates an information entity to other entities in which the information entity holds some information which dscribes some facet of the other entity, such as the arrow direction on a sign."^^xsd:string
- Added: "James Malone"^^xsd:string
- Added: rdfs:label "is about"@en
- Added: http://purl.obolibrary.org/obo/IAO_0000125
- Added: "IAO"^^xsd:string
http://purl.obolibrary.org/obo/IAO_0000219
- Added: "2009-11-10 Alan Ruttenberg. Old definition said the following to emphasize the generic nature of this relation. We no longer have 'specifically denotes', which would have been primitive, so make this relation primitive. g denotes r =def r is a portion of reality there is some c that is a concretization of g every c that is a concretization of g specifically denotes r"@en
- Added: domain http://purl.obolibrary.org/obo/IAO_0000030
- Added: "A primitive, instance-level, relation obtaining between an information content entity and some portion of reality. Denotation is what happens when someone creates an information content entity E in order to specifically refer to something. The only relation between E and the thing is that E can be used to 'pick out' the thing. This relation connects those two together. Freedictionary.com sense 3: To signify directly; refer to specifically"@en
- Added: "person:Alan Ruttenberg"@en
- Added: InverseObjectProperties InverseObjectProperties(<http://purl.obolibrary.org/obo/IAO_0000219> <http://purl.obolibrary.org/obo/IAO_0000235>)
- Added: SubProperty of http://purl.obolibrary.org/obo/IAO_0000136
- Added: Range http://purl.obolibrary.org/obo/BFO_0000001
- Added: rdfs:comment ""@en
- Added: "A person's name denotes the person. A variable name in a computer program denotes some piece of memory. Lexically equivalent strings can denote different things, for instance \"Alan\" can denote different people. In each case of use, there is a case of the denotation relation obtaining, between \"Alan\" and the person that is being named."@en
- Added: "Conversations with Barry Smith, Werner Ceusters, Bjoern Peters, Michel Dumontier, Melanie Courtot, James Malone, Bill Hogan"@en
- Added: rdfs:label "denotes"@en
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
http://purl.obolibrary.org/obo/IAO_0000235
- Added: https://github.com/information-artifact-ontology/IAO/issues/206
- Added: "inverse of the relation 'denotes'"@en
- Added: Range http://purl.obolibrary.org/obo/IAO_0000030
- Added: InverseObjectProperties InverseObjectProperties(<http://purl.obolibrary.org/obo/IAO_0000219> <http://purl.obolibrary.org/obo/IAO_0000235>)
- Added: domain http://purl.obolibrary.org/obo/BFO_0000001
- Added: "Person: Jie Zheng, Chris Stoeckert, Mike Conlon"@en
- Added: rdfs:label "denoted by"@en
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
http://purl.obolibrary.org/obo/RO_0000056
- Added: "a relation between a continuant and a process, in which the continuant is somehow involved in the process"@en
- Added: EquivalentObjectProperties EquivalentObjectProperties(<http://purl.obolibrary.org/obo/RO_0000056> <https://nfdi.fiz-karlsruhe.de/ontology/participantOf>)
- Added: "participates in"@en
- Added: InverseObjectProperties InverseObjectProperties(<http://purl.obolibrary.org/obo/RO_0000056> <http://purl.obolibrary.org/obo/RO_0000057>)
- Added: rdfs:label "participates in"@en
- Added: "this investigator participates in this investigation"@en
- Added: domain http://purl.obolibrary.org/obo/BFO_0000002
- Added: "this input material (or this output material) participates in this process"@en
- Added: "this blood clot participates in this blood coagulation"@en
- Added: Range http://purl.obolibrary.org/obo/BFO_0000003
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Added: "participates_in"@en
http://purl.obolibrary.org/obo/RO_0000057
- Added: InverseObjectProperties InverseObjectProperties(<http://purl.obolibrary.org/obo/RO_0000056> <http://purl.obolibrary.org/obo/RO_0000057>)
- Added: "Has_participant is a primitive instance-level relation between a process, a continuant, and a time at which the continuant participates in some way in the process. The relation obtains, for example, when this particular process of oxygen exchange across this particular alveolar membrane has_participant this particular sample of hemoglobin at this particular time."@en
- Added: "this investigation has participant this investigator"@en
- Added: EquivalentObjectProperties EquivalentObjectProperties(<http://purl.obolibrary.org/obo/RO_0000057> <https://nfdi.fiz-karlsruhe.de/ontology/participant>)
- Added: domain http://purl.obolibrary.org/obo/BFO_0000003
- Added: Range http://purl.obolibrary.org/obo/BFO_0000002
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Added: "this process has participant this input material (or this output material)"@en
- Added: "has_participant"@en
- Added: "http://www.obofoundry.org/ro/#OBO_REL:has_participant"^^xsd:string
- Added: rdfs:label "has participant"@en
- Added: "a relation between a process and a continuant, in which the continuant is somehow involved in the process"@en
- Added: "has participant"@en
- Added: "this blood coagulation has participant this blood clot"@en
http://purl.obolibrary.org/obo/RO_0000080
- Added: "A quality inheres in its bearer at all times for which the quality exists."@en
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Added: "is quality of"@en
- Added: SubProperty of http://purl.obolibrary.org/obo/RO_0000052
- Added: "a relation between a quality and an independent continuant (the bearer), in which the quality specifically depends on the bearer for its existence"@en
- Added: "quality_of"@en
- Added: rdfs:comment "This relation is modeled after the BFO relation of the same name which was in BFO2, but is used in a more restricted sense - specifically, we model this relation as functional (inherited from characteristic-of). Note that this relation is now removed from BFO2020."^^xsd:string
- Added: InverseObjectProperties InverseObjectProperties(<http://purl.obolibrary.org/obo/RO_0000080> <http://purl.obolibrary.org/obo/RO_0000086>)
- Added: "this red color is a quality of this apple"@en
- Added: rdfs:label "quality of"@en
http://purl.obolibrary.org/obo/RO_0000086
- Added: "has_quality"@en
- Added: SubProperty of http://purl.obolibrary.org/obo/RO_0000053
- Added: rdfs:label "has quality"@en
- Added: Range http://purl.obolibrary.org/obo/BFO_0000019
- Added: "A bearer can have many qualities, and its qualities can exist for different periods of time, but none of its qualities can exist when the bearer does not exist."@en
- Added: InverseObjectProperties InverseObjectProperties(<http://purl.obolibrary.org/obo/RO_0000080> <http://purl.obolibrary.org/obo/RO_0000086>)
- Added: "a relation between an independent continuant (the bearer) and a quality, in which the quality specifically depends on the bearer for its existence"@en
- Added: "this apple has quality this red color"@en
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
http://purl.obolibrary.org/obo/RO_0000087
- Added: "this person has role this investigator role (more colloquially: this person has this role of investigator)"@en
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Added: "a relation between an independent continuant (the bearer) and a role, in which the role specifically depends on the bearer for its existence"@en
- Added: Range http://purl.obolibrary.org/obo/BFO_0000023
- Added: SubProperty of http://purl.obolibrary.org/obo/RO_0000053
- Added: InverseObjectProperties InverseObjectProperties(<http://purl.obolibrary.org/obo/RO_0000081> <http://purl.obolibrary.org/obo/RO_0000087>)
- Added: rdfs:label "has role"@en
- Added: "has_role"@en
- Added: domain http://purl.obolibrary.org/obo/BFO_0000004
- Added: "A bearer can have many roles, and its roles can exist for different periods of time, but none of its roles can exist when the bearer does not exist. A role need not be realized at all the times that the role exists."@en
http://purl.obolibrary.org/obo/RO_0001015
- Added: rdfs:label "location of"@en
- Added: InverseObjectProperties InverseObjectProperties(<http://purl.obolibrary.org/obo/RO_0001015> <http://purl.obolibrary.org/obo/RO_0001025>)
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Added: "is location of"@en
- Added: "this cage is the location of this rat"@en
- Added: "Most location relations will only hold at certain times, but this is difficult to specify in OWL. See http://purl.obolibrary.org/obo/ro/docs/temporal-semantics/"@en
- Added: TransitiveObjectProperty TransitiveObjectProperty(<http://purl.obolibrary.org/obo/RO_0001015>)
- Added: "a relation between two independent continuants, the location and the target, in which the target is entirely within the location"@en
- Added: "location_of"@en
- Added: http://purl.obolibrary.org/obo/RO_0001901
- Added: "my head is the location of my brain"@en
http://www.ebi.ac.uk/swo/SWO_0000741
- Added: rdfs:label "is encoded in"^^xsd:string
- Added: "Allyson Lister"^^xsd:string
- Added: "Linking a type of software to its particular programming language."^^xsd:string
- Added: "Is encoded in is an \"is about\" relationship which describes the type of encoding used for the referenced class."^^xsd:string
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Added: SubProperty of http://purl.obolibrary.org/obo/IAO_0000136
https://nfdi.fiz-karlsruhe.de/ontology/bestPractice
- Added: rdfs:label "has best practice"@en
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
- Deleted: rdfs:label "best practice"@en
- Deleted: SubProperty of http://purl.obolibrary.org/obo/IAO_0000136
https://nfdi.fiz-karlsruhe.de/ontology/bestPracticeOf
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: "2024-04-09. Sasha Bruns: Following e.g. the Software Ontology (SWO), relations between two ICE are categorized under the overarching property \"is about.\" Consequently, inverse properties become subproperties of a single superproperty (see e.g. swo:is_license_for and swo:has_license)."@en
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
- Deleted: SubProperty of http://purl.obolibrary.org/obo/IAO_0000136
https://nfdi.fiz-karlsruhe.de/ontology/contactPoint
- Added: rdfs:label "has contact point"@en
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
- Deleted: rdfs:label "contact point"@en
https://nfdi.fiz-karlsruhe.de/ontology/contactPointOf
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
https://nfdi.fiz-karlsruhe.de/ontology/contributor
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Added: rdfs:label "has contributor"@en
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
- Deleted: rdfs:label "contributor"@en
https://nfdi.fiz-karlsruhe.de/ontology/contributorOf
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
https://nfdi.fiz-karlsruhe.de/ontology/country
- Added: SubProperty of https://nfdi.fiz-karlsruhe.de/ontology/partOf
- Added: rdfs:label "of country"@en
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: SubProperty of http://purl.obolibrary.org/obo/BFO_0000050
- Deleted: rdfs:label "country"@en
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
https://nfdi.fiz-karlsruhe.de/ontology/countryOf
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
https://nfdi.fiz-karlsruhe.de/ontology/dataset
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
https://nfdi.fiz-karlsruhe.de/ontology/datasetOf
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: "2024-04-09. Sasha Bruns: Following e.g. the Software Ontology (SWO), relations between two ICE are categorized under the overarching property \"is about.\" Consequently, inverse properties become subproperties of a single superproperty (see e.g. swo:is_license_for and swo:has_license)."@en
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
https://nfdi.fiz-karlsruhe.de/ontology/exportFormat
- Added: rdfs:label "has export format"@en
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
- Deleted: SubProperty of http://purl.obolibrary.org/obo/IAO_0000136
- Deleted: rdfs:label "export format"@en
https://nfdi.fiz-karlsruhe.de/ontology/exportFormatOf
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: SubProperty of http://purl.obolibrary.org/obo/IAO_0000136
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
- Deleted: "2024-04-09. Sasha Bruns: Following e.g. the Software Ontology (SWO), relations between two ICE are categorized under the overarching property \"is about.\" Consequently, inverse properties become subproperties of a single superproperty (see e.g. swo:is_license_for and swo:has_license)."@en
https://nfdi.fiz-karlsruhe.de/ontology/federalState
- Added: rdfs:label "of federal state"@en
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Added: SubProperty of https://nfdi.fiz-karlsruhe.de/ontology/partOf
- Deleted: SubProperty of https://nfdi.fiz-karlsruhe.de/ontology/part
- Deleted: rdfs:label "federal state"@en
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
https://nfdi.fiz-karlsruhe.de/ontology/federalStateOf
- Added: SubProperty of https://nfdi.fiz-karlsruhe.de/ontology/part
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: SubProperty of https://nfdi.fiz-karlsruhe.de/ontology/partOf
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
https://nfdi.fiz-karlsruhe.de/ontology/fundingOrganization
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Added: rdfs:label "has funding organization"@en
- Deleted: rdfs:label "funding organization"@en
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
https://nfdi.fiz-karlsruhe.de/ontology/fundingOrganizationOf
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
https://nfdi.fiz-karlsruhe.de/ontology/license
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Added: "2024-04-09. Sasha Bruns: Following e.g. the Software Ontology (SWO), relations between two ICE are categorized under the overarching property \"is about.\" Consequently, inverse properties become subproperties of a single superproperty (see e.g. swo:is_license_for and swo:has_license)."^^xsd:string
- Added: rdfs:label "has license"@en
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
- Deleted: rdfs:label "license"@en
https://nfdi.fiz-karlsruhe.de/ontology/licenseOf
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
https://nfdi.fiz-karlsruhe.de/ontology/location
- Added: EquivalentObjectProperties EquivalentObjectProperties(<http://purl.obolibrary.org/obo/RO_0001025> <https://nfdi.fiz-karlsruhe.de/ontology/location>)
- Added: rdfs:label "has location"@en
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
- Deleted: domain http://www.w3.org/2002/07/owl#Thing
- Deleted: rdfs:label "location"@en
- Deleted: Range https://nfdi.fiz-karlsruhe.de/ontology/Place
https://nfdi.fiz-karlsruhe.de/ontology/locationOf
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
https://nfdi.fiz-karlsruhe.de/ontology/mediaType
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Added: rdfs:label "has media type"@en
- Deleted: rdfs:label "media type"@en
- Deleted: SubProperty of http://purl.obolibrary.org/obo/IAO_0000136
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
https://nfdi.fiz-karlsruhe.de/ontology/mediaTypeOf
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
https://nfdi.fiz-karlsruhe.de/ontology/member
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
- Deleted: SubProperty of http://purl.obolibrary.org/obo/BFO_0000051
https://nfdi.fiz-karlsruhe.de/ontology/memberOf
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
https://nfdi.fiz-karlsruhe.de/ontology/parentOrganization
- Added: rdfs:label "has parent organization"@en
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
- Deleted: rdfs:label "parent organization"@en
https://nfdi.fiz-karlsruhe.de/ontology/part
- Added: rdfs:label "has part"@en
- Added: EquivalentObjectProperties EquivalentObjectProperties(<http://purl.obolibrary.org/obo/BFO_0000051> <https://nfdi.fiz-karlsruhe.de/ontology/part>)
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
- Deleted: rdfs:label "part"@en
https://nfdi.fiz-karlsruhe.de/ontology/partOf
- Added: EquivalentObjectProperties EquivalentObjectProperties(<http://purl.obolibrary.org/obo/BFO_0000050> <https://nfdi.fiz-karlsruhe.de/ontology/partOf>)
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: Range http://www.w3.org/2002/07/owl#Thing
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
- Deleted: SubProperty of http://purl.obolibrary.org/obo/BFO_0000050
- Deleted: domain http://www.w3.org/2002/07/owl#Thing
https://nfdi.fiz-karlsruhe.de/ontology/participant
- Added: rdfs:label "has participant"@en
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Added: EquivalentObjectProperties EquivalentObjectProperties(<http://purl.obolibrary.org/obo/RO_0000057> <https://nfdi.fiz-karlsruhe.de/ontology/participant>)
- Deleted: SubProperty of http://purl.obolibrary.org/obo/RO_0000057
- Deleted: Range https://nfdi.fiz-karlsruhe.de/ontology/Agent
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
- Deleted: rdfs:label "participant"@en
- Deleted: domain https://nfdi.fiz-karlsruhe.de/ontology/Project
https://nfdi.fiz-karlsruhe.de/ontology/participantOf
- Added: EquivalentObjectProperties EquivalentObjectProperties(<http://purl.obolibrary.org/obo/RO_0000056> <https://nfdi.fiz-karlsruhe.de/ontology/participantOf>)
- Added: rdfs:comment "inverse of property \"participant\""@en
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: SubProperty of http://purl.obolibrary.org/obo/RO_0000056
- Deleted: rdfs:comment "inverse of property \"prticipant\""@en
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
https://nfdi.fiz-karlsruhe.de/ontology/partnerOrganization
- Added: rdfs:label "has partner organization"@en
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: rdfs:label "partner organization"@en
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
https://nfdi.fiz-karlsruhe.de/ontology/programmingLanguage
- Added: rdfs:label "has programming language"@en
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
- Deleted: rdfs:label "programming language"@en
- Deleted: SubProperty of http://purl.obolibrary.org/obo/IAO_0000136
https://nfdi.fiz-karlsruhe.de/ontology/programmingLanguageOf
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
https://nfdi.fiz-karlsruhe.de/ontology/publisher
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Added: rdfs:label "has publisher"@en
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
- Deleted: rdfs:label "publisher"@en
https://nfdi.fiz-karlsruhe.de/ontology/publisherOf
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
https://nfdi.fiz-karlsruhe.de/ontology/relatedProject
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Added: rdfs:label "has related project"@en
- Deleted: rdfs:label "related project"@en
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
https://nfdi.fiz-karlsruhe.de/ontology/representedCollection
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
https://nfdi.fiz-karlsruhe.de/ontology/representedCollectionOf
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
- Deleted: Range https://nfdi.fiz-karlsruhe.de/ontology/Resource
- Deleted: domain https://nfdi.fiz-karlsruhe.de/ontology/Collection
https://nfdi.fiz-karlsruhe.de/ontology/semanticExpressivity
- Added: rdfs:label "has semantic expressivity"@en
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
- Deleted: rdfs:label "semantic expressivity"@en
https://nfdi.fiz-karlsruhe.de/ontology/semanticExpressivityOf
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
https://nfdi.fiz-karlsruhe.de/ontology/software
- Added: rdfs:label "has software"@en
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: SubProperty of http://purl.obolibrary.org/obo/IAO_0000136
- Deleted: rdfs:label "software"@en
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
https://nfdi.fiz-karlsruhe.de/ontology/softwareOf
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
https://nfdi.fiz-karlsruhe.de/ontology/sparqlEndpoint
- Added: rdfs:label "has sparql endpoint"@en
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
- Deleted: SubProperty of http://purl.obolibrary.org/obo/IAO_0000136
- Deleted: rdfs:label "sparql endpoint"@en
https://nfdi.fiz-karlsruhe.de/ontology/sparqlEndpointOf
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
https://nfdi.fiz-karlsruhe.de/ontology/specification
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Added: rdfs:label "has specification"@en
- Deleted: rdfs:label "specification"@en
- Deleted: SubProperty of http://purl.obolibrary.org/obo/IAO_0000136
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
https://nfdi.fiz-karlsruhe.de/ontology/specificationOf
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
https://nfdi.fiz-karlsruhe.de/ontology/standard
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Added: rdfs:label "has standard"@en
- Deleted: rdfs:label "standard"@en
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
- Deleted: SubProperty of http://purl.obolibrary.org/obo/IAO_0000136
https://nfdi.fiz-karlsruhe.de/ontology/standardOf
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
https://nfdi.fiz-karlsruhe.de/ontology/subjectArea
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
https://nfdi.fiz-karlsruhe.de/ontology/subjectAreaOf
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
https://nfdi.fiz-karlsruhe.de/ontology/subsidiaryOrganization
- Added: rdfs:label "has subsidiary organization"@en
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
- Deleted: rdfs:label "subsidiary organization"@en
https://nfdi.fiz-karlsruhe.de/ontology/technology
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Added: rdfs:label "has technology"@en
- Deleted: rdfs:label "technology"@en
- Deleted: SubProperty of http://purl.obolibrary.org/obo/IAO_0000136
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
https://nfdi.fiz-karlsruhe.de/ontology/technologyOf
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
https://nfdi.fiz-karlsruhe.de/ontology/url
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
https://nfdi.fiz-karlsruhe.de/ontology/urlOf
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0

Added object properties

http://purl.obolibrary.org/obo/OBI_0000299
- Added: EquivalentObjectProperties EquivalentObjectProperties(<http://purl.obolibrary.org/obo/OBI_0000299> ObjectInverseOf(<http://purl.obolibrary.org/obo/OBI_0000312>))
- Added: domain http://purl.obolibrary.org/obo/OBI_0000011
- Added: SubProperty of http://purl.obolibrary.org/obo/RO_0000057
http://purl.obolibrary.org/obo/OBI_0000312
- Added: Range http://purl.obolibrary.org/obo/OBI_0000011
- Added: SubProperty of http://purl.obolibrary.org/obo/RO_0000056
http://purl.obolibrary.org/obo/RO_0000052
- Added: FunctionalObjectProperty FunctionalObjectProperty(<http://purl.obolibrary.org/obo/RO_0000052>)
- Added: InverseObjectProperties InverseObjectProperties(<http://purl.obolibrary.org/obo/RO_0000052> <http://purl.obolibrary.org/obo/RO_0000053>)
http://purl.obolibrary.org/obo/RO_0000053
- Added: InverseObjectProperties InverseObjectProperties(<http://purl.obolibrary.org/obo/RO_0000052> <http://purl.obolibrary.org/obo/RO_0000053>)
- Added: InverseFunctionalObjectProperty InverseFunctionalObjectProperty(<http://purl.obolibrary.org/obo/RO_0000053>)
- Added: Range http://purl.obolibrary.org/obo/BFO_0000020
http://purl.obolibrary.org/obo/RO_0000079
- Added: SubProperty of http://purl.obolibrary.org/obo/RO_0000052
- Added: domain http://purl.obolibrary.org/obo/BFO_0000034
- Added: InverseObjectProperties InverseObjectProperties(<http://purl.obolibrary.org/obo/RO_0000079> <http://purl.obolibrary.org/obo/RO_0000085>)
http://purl.obolibrary.org/obo/RO_0000081
- Added: SubProperty of http://purl.obolibrary.org/obo/RO_0000052
- Added: InverseObjectProperties InverseObjectProperties(<http://purl.obolibrary.org/obo/RO_0000081> <http://purl.obolibrary.org/obo/RO_0000087>)
http://purl.obolibrary.org/obo/RO_0000085
- Added: Range http://purl.obolibrary.org/obo/BFO_0000034
- Added: SubProperty of http://purl.obolibrary.org/obo/RO_0000053
- Added: domain http://purl.obolibrary.org/obo/BFO_0000004
- Added: InverseObjectProperties InverseObjectProperties(<http://purl.obolibrary.org/obo/RO_0000079> <http://purl.obolibrary.org/obo/RO_0000085>)
http://purl.obolibrary.org/obo/RO_0000091
- Added: Range http://purl.obolibrary.org/obo/BFO_0000016
- Added: InverseObjectProperties InverseObjectProperties(<http://purl.obolibrary.org/obo/RO_0000091> <http://purl.obolibrary.org/obo/RO_0000092>)
- Added: domain http://purl.obolibrary.org/obo/BFO_0000004
- Added: SubProperty of http://purl.obolibrary.org/obo/RO_0000053
http://purl.obolibrary.org/obo/RO_0000092
- Added: SubProperty of http://purl.obolibrary.org/obo/RO_0000052
- Added: InverseObjectProperties InverseObjectProperties(<http://purl.obolibrary.org/obo/RO_0000091> <http://purl.obolibrary.org/obo/RO_0000092>)
http://purl.obolibrary.org/obo/RO_0001025
- Added: Range http://purl.obolibrary.org/obo/BFO_0000004
- Added: EquivalentObjectProperties EquivalentObjectProperties(<http://purl.obolibrary.org/obo/RO_0001025> <https://nfdi.fiz-karlsruhe.de/ontology/location>)
- Added: domain http://purl.obolibrary.org/obo/BFO_0000004
- Added: TransitiveObjectProperty TransitiveObjectProperty(<http://purl.obolibrary.org/obo/RO_0001025>)
- Added: InverseObjectProperties InverseObjectProperties(<http://purl.obolibrary.org/obo/RO_0001015> <http://purl.obolibrary.org/obo/RO_0001025>)
- Added: domain Intersection of (http://purl.obolibrary.org/obo/BFO_0000004, )
- Added: Range Intersection of (http://purl.obolibrary.org/obo/BFO_0000004, )
http://www.w3.org/2002/07/owl#topObjectProperty

Deleted object properties

http://purl.obolibrary.org/obo/RO_0000059

Data Properties

Modified data properties

https://nfdi.fiz-karlsruhe.de/ontology/birthDate
- Added: "The range has been set to \"Literal\" because we expect \"untidy\" data, i.e. for most datums a structured value cannot be obtained through parsing."@en
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
https://nfdi.fiz-karlsruhe.de/ontology/deathDate
- Added: "The range has been set to \"Literal\" because we expect \"untidy\" data, i.e. for most datums a structured value cannot be obtained through parsing."^^xsd:string
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
https://nfdi.fiz-karlsruhe.de/ontology/dissolutionDate
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Added: "The range has been set to \"Literal\" because we expect \"untidy\" data, i.e. for most datums a structured value cannot be obtained through parsing."^^xsd:string
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
https://nfdi.fiz-karlsruhe.de/ontology/emailAddress
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
https://nfdi.fiz-karlsruhe.de/ontology/endDate
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Added: "The range has been set to \"Literal\" because we expect \"untidy\" data, i.e. for most datums a structured value cannot be obtained through parsing."^^xsd:string
- Added: Range http://www.w3.org/2000/01/rdf-schema#Literal
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
https://nfdi.fiz-karlsruhe.de/ontology/fileExtension
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
https://nfdi.fiz-karlsruhe.de/ontology/foundationDate
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Added: "The range has been set to \"Literal\" because we expect \"untidy\" data, i.e. for most datums a structured value cannot be obtained through parsing."^^xsd:string
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0
https://nfdi.fiz-karlsruhe.de/ontology/startDate
- Added: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology
- Added: "The range has been set to \"Literal\" because we expect \"untidy\" data, i.e. for most datums a structured value cannot be obtained through parsing."^^xsd:string
- Deleted: rdfs:isDefinedBy https://nfdi.fiz-karlsruhe.de/ontology/2.0.0

Acknowledgments back to ToC

The authors would like to thank Silvio Peroni for developing LODE, a Live OWL Documentation Environment, which is used for representing the Cross Referencing Section of this document and Daniel Garijo for developing Widoco, the program used to create the template used in this documentation.

NFDIcore Ontology

Release: 2024-10-21

Abstract

NFDIcore: Overview back to ToC

Classes

Object Properties

Data Properties

Annotation Properties

Named Individuals

SWRL Rules

NFDIcore: Description back to ToC

Cross-reference for NFDIcore classes, object properties and data properties back to ToC

Classes

academic disciplinec back to ToC or Class ToC

action specificationc back to ToC or Class ToC

agentc back to ToC or Class ToC

cityc back to ToC or Class ToC

collectionc back to ToC or Class ToC

consortiumc back to ToC or Class ToC

consortium memberc back to ToC or Class ToC

consortium member rolec back to ToC or Class ToC

contact point rolec back to ToC or Class ToC

contactingc back to ToC or Class ToC

continuantc back to ToC or Class ToC

contributingc back to ToC or Class ToC

contributor rolec back to ToC or Class ToC

controlled vocabularyc back to ToC or Class ToC

countryc back to ToC or Class ToC

creative workc back to ToC or Class ToC

CreativeWorkc back to ToC or Class ToC

curation status specificationc back to ToC or Class ToC

data about an ontology partc back to ToC or Class ToC

data curation servicec back to ToC or Class ToC

data itemc back to ToC or Class ToC

data portalc back to ToC or Class ToC

databases servicec back to ToC or Class ToC

datasetc back to ToC or Class ToC

denotator typec back to ToC or Class ToC

directive information entityc back to ToC or Class ToC

dispositionc back to ToC or Class ToC

documentc back to ToC or Class ToC

entityc back to ToC or Class ToC

eventc back to ToC or Class ToC

federal statec back to ToC or Class ToC

functionc back to ToC or Class ToC

funding organization rolec back to ToC or Class ToC

generically dependent continuantc back to ToC or Class ToC

glossaryc back to ToC or Class ToC

immaterial entityc back to ToC or Class ToC

independent continuantc back to ToC or Class ToC

information content entityc back to ToC or Class ToC

libraries & APIs servicec back to ToC or Class ToC

licencec back to ToC or Class ToC

licensec back to ToC or Class ToC

material entityc back to ToC or Class ToC

media typec back to ToC or Class ToC

MIME-typec back to ToC or Class ToC

objective specificationc back to ToC or Class ToC

obsolescence reason specificationc back to ToC or Class ToC

occurrentc back to ToC or Class ToC

ontologyc back to ToC or Class ToC

organizationc back to ToC or Class ToC

personc back to ToC or Class ToC

placec back to ToC or Class ToC

plan specificationc back to ToC or Class ToC

planned processc back to ToC or Class ToC

processc back to ToC or Class ToC

programming languagec back to ToC or Class ToC

programming languagec back to ToC or Class ToC

projectc back to ToC or Class ToC

publicationc back to ToC or Class ToC

publicationc back to ToC or Class ToC

publisher rolec back to ToC or Class ToC

publishing processc back to ToC or Class ToC

qualityc back to ToC or Class ToC

realizable entityc back to ToC or Class ToC

resourcec back to ToC or Class ToC

rolec back to ToC or Class ToC

semantic expressivityc back to ToC or Class ToC

servicec back to ToC or Class ToC

academic discipline^c back to ToC or Class ToC

action specification^c back to ToC or Class ToC

agent^c back to ToC or Class ToC

city^c back to ToC or Class ToC

collection^c back to ToC or Class ToC

consortium^c back to ToC or Class ToC

consortium member^c back to ToC or Class ToC

consortium member role^c back to ToC or Class ToC

contact point role^c back to ToC or Class ToC

contacting^c back to ToC or Class ToC

continuant^c back to ToC or Class ToC

contributing^c back to ToC or Class ToC

contributor role^c back to ToC or Class ToC

controlled vocabulary^c back to ToC or Class ToC

country^c back to ToC or Class ToC

creative work^c back to ToC or Class ToC

CreativeWork^c back to ToC or Class ToC

curation status specification^c back to ToC or Class ToC

data about an ontology part^c back to ToC or Class ToC

data curation service^c back to ToC or Class ToC

data item^c back to ToC or Class ToC

data portal^c back to ToC or Class ToC

databases service^c back to ToC or Class ToC

dataset^c back to ToC or Class ToC

denotator type^c back to ToC or Class ToC

directive information entity^c back to ToC or Class ToC

disposition^c back to ToC or Class ToC

document^c back to ToC or Class ToC

entity^c back to ToC or Class ToC

event^c back to ToC or Class ToC

federal state^c back to ToC or Class ToC

function^c back to ToC or Class ToC

funding organization role^c back to ToC or Class ToC

generically dependent continuant^c back to ToC or Class ToC

glossary^c back to ToC or Class ToC

immaterial entity^c back to ToC or Class ToC

independent continuant^c back to ToC or Class ToC

information content entity^c back to ToC or Class ToC

libraries & APIs service^c back to ToC or Class ToC

licence^c back to ToC or Class ToC

license^c back to ToC or Class ToC

material entity^c back to ToC or Class ToC

media type^c back to ToC or Class ToC

MIME-type^c back to ToC or Class ToC

objective specification^c back to ToC or Class ToC

obsolescence reason specification^c back to ToC or Class ToC

occurrent^c back to ToC or Class ToC

ontology^c back to ToC or Class ToC

organization^c back to ToC or Class ToC

person^c back to ToC or Class ToC

place^c back to ToC or Class ToC

plan specification^c back to ToC or Class ToC

planned process^c back to ToC or Class ToC

process^c back to ToC or Class ToC

programming language^c back to ToC or Class ToC

programming language^c back to ToC or Class ToC

project^c back to ToC or Class ToC

publication^c back to ToC or Class ToC

publication^c back to ToC or Class ToC

publisher role^c back to ToC or Class ToC

publishing process^c back to ToC or Class ToC

quality^c back to ToC or Class ToC

realizable entity^c back to ToC or Class ToC

resource^c back to ToC or Class ToC

role^c back to ToC or Class ToC

semantic expressivity^c back to ToC or Class ToC

service^c back to ToC or Class ToC

Service^c back to ToC or Class ToC

site^c back to ToC or Class ToC

software^c back to ToC or Class ToC

software^c back to ToC or Class ToC

software development^c back to ToC or Class ToC

source code module^c back to ToC or Class ToC

spatial region^c back to ToC or Class ToC

specifically dependent continuant^c back to ToC or Class ToC

specification^c back to ToC or Class ToC

standard^c back to ToC or Class ToC

storage service^c back to ToC or Class ToC

support & consulting service^c back to ToC or Class ToC

taxonomy^c back to ToC or Class ToC